Bifidobacterium coryneforme: BCOR_0390
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Entry
BCOR_0390 CDS
T03236
Name
(GenBank) activator of 2-hydroxyglutaryl-CoA dehydratase
Organism
bcor
Bifidobacterium coryneforme
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2229
BcrAD_BadFG
Motif
Other DBs
NCBI-ProteinID:
AII74409
UniProt:
A0A076JHH2
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All DBs
Position
512578..518022
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AA seq
1814 aa
AA seq
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MSEGVDAPGRYRGTGTGELLRVGLDIGSTTVKAVVLGVEDGLDQALFSDYRRHHANVRQC
VAELVTDIRIALSRVGLAKNPISLVITGSGGLELASQLQAEFAQEVIAETEAINATYPEG
DVIIELGGEDAKITYLKPTPEQRMNGSCAGGTGAFIDQMATLLNTDASGLNEMASRYRTI
YPIASRCGVFAKSDLQPLINDGAAKEDLAASIFNAVATQTISGLACGRPIRGNVIFLGGP
LFFMSELRESFKRILQDRVSRYIIPENAHLYVAYGAAIMAGRGDQDDSDGAAQVKTDYSP
DTDVNDPFGPAWGLDQEEVDRARSEKATDLDRLALKDAMQDGRTTSLVGNEEGSGAAVPA
GRSHPEEVTQDGCRTGHFDLSSLDGVLAALAGLENMPSTARTIRPLFLNTQEHEEFDDRH
GAQVIPTGDLTGAKGPHFLGIDAGSTTIKAVLINDDKTIVWSTYGVHKDSPLIAAVDIVR
EVRKSLPDGAYIARACATGYGEGLITAGLHVDEGVVETMAHYRAAEEISPGVTSVIDIGG
QDMKYIAVNDGVIDSICVNEACSAGCGSFLQTFAQSMGISIQEFTRQALASEAPTDLGSR
CTVFMNSSVKQAQKEGASPEDIAAGLCYSVVRNALYKVIKLRDANALGPVVVVQGGTFLN
DAVLRAFELLTGRKVTRPNIAGLMGAYGAALTARMHCPQNEEIEDIVAAGPRMAHPSLGV
ADGDGAKGVTPTTVNKAPVPVRAQLSQASVNRIESRGSDSGRSQVPPSAGSKNEQGFKST
LPGIQVDEGHVVSSILAGDQLDNLSMTTTHDVCKLCQNHCKLTITEFEDGGRYVTGNRCE
RGGDKNRKRSDRPNLYDFKYKRAFAYRRLTPDKATRGDIGIPRVLNMYEDYPFWFTLLTS
LGFRVMISGRSNHELFESGMESIASENICYPAKLVHGHIRSLLDKGVDTIFYPCVTYEQE
LVPETDNHYNCPIVANYPVVIEANVAELKEDGVRFMRPYFNLSNKEKMVERIVKVFDWAG
VGEEEARIAVQEAYREDARFKEDVRQEGLRALAYMQEYGVKGVVLSGRPYHVDPEVNHGI
PETICSLGMAVLSEDSICELDVHDLPKLSDYIIPEAGERALASNNPTAAKFRKTVPGFGD
DRQKMPLRVTDQWAYHSRLYSAAGFVSEYPDLELVQLVSFGCGVDAITTDQVQEILADKG
DVYTQLKIDEVSNLGAAKIRLRSLKAAMDERHQRDLDEEGETLSAREVPANTADRDSGLL
PDSFHVGNSADSPNSQAIDGRTETGGAGTGERSKSDRFRSTNAQRISLSEQKADIVGLAR
FVALHDKSDQGLVGLHPMGIRPIRETRASQHKGAEKKQAEGDGEQGPGVQNGGAAAKPTL
SKYATEHRFTKAMGHKYTVVAPQMSPVHFSLLESVFSSADYHFELLKHASAEDINTGVKF
VNNDACFPAIIVVGQLVNAFLSGKFDPHKCAVIVTQTGGMCRATNYYGLLRKALADAGYG
YVPIITLSVQGFRANPGLQVTPALLHRAVKAFYLGDAMIECLLRVRPYEQEPGSANRLYK
LWDTICRETIEHHGYSRTAKKVYGRGCLPYGTLMKRMIQAFDQLPLRGIPRKPRVGVVGE
ILVKYHPDANNHVVDLIESQGCEAVLPGVCDFMVNGISNAEWNEEMLGTGGQVGIKKVVL
KAADAYRAPMIAGFRASRGKFDIPAHISELREKAASVTSLGVQAGEGWLLTGEIIELIQS
GAPNIVCAQPFACLPNHVTGRGMFGKIRRSYPEANIVSIDYDPGASEANQLNRIKLMIAA
AKKQGDQEKVPDRP
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaggcgtcgacgccccaggtcggtataggggaacgggaacaggggaacttctg
cgcgtggggcttgatatcggctccaccacggtcaaggccgtggttcttggagtcgaggac
gggctggatcaggccctcttcagcgactatcgccgacatcacgccaatgttcgacagtgc
gtggccgagctggtcaccgacatcaggatcgccctctccagggtcgggctggcgaagaac
ccgatcagtctcgtcatcaccggttccggaggtctggaactggccagtcagctccaggct
gagttcgcccaggaggtcatcgccgaaaccgaagccatcaacgccacctatcccgaaggc
gatgtaatcatcgaacttggcggcgaggacgccaagatcacctacctgaagccaacccct
gagcaaaggatgaatggttcctgcgcgggcggaacaggtgcgttcatagaccagatggcc
acccttctcaacaccgatgcttccggcctgaacgaaatggcctccagatacaggaccatc
taccccattgcgtcacgttgcggggttttcgccaaatccgatctccaacccctgataaac
gacggggcggccaaggaggacctggccgcgtcaatcttcaatgctgtagccacccaaacc
atatcaggtttggcctgcggccgacccatccggggcaacgtgattttcctgggtggaccc
ctgttcttcatgagtgagctcagggaatccttcaagcgcattctccaggaccgggtcagc
cgctacatcatccccgagaacgcccacctttatgtcgcttacggggcggccatcatggcc
gggcgcggcgatcaggatgattctgatggtgctgcgcaggtgaaaacagactactcacct
gataccgacgtgaatgaccccttcggcccggcatggggactggaccaggaggaggtcgac
agggccagatccgagaaggccaccgacctggataggctggctctcaaggatgcgatgcag
gatggccgtacaaccagtctggtcggcaacgaagaggggagcggggcggcggttccggct
gggcggtcccaccctgaggaagtcacacaggatggctgccggaccgggcatttcgatctg
tcgtcgctggatggtgtgcttgctgctctggccggtctggagaacatgccctcgacggcc
aggactatccgtcccctctttctgaatacgcaagagcacgaggagtttgacgaccggcat
ggtgcccaggtcatcccaaccggggatctgacgggggccaaggggccgcactttctgggg
attgacgcgggaagcaccaccatcaaggccgttctgatcaatgacgacaagaccattgtt
tggtccacctatggggtccataaggacagtcctctgattgccgccgtggatattgtcagg
gaggttcggaagtccctgccggatggcgcctatatcgcccgggcctgcgccaccggttac
ggcgaaggcctgatcaccgccggcctgcacgtggacgagggtgtggttgagaccatggcg
cattaccgggcggctgaagagataagcccgggggtcacctcggtcatcgacatcggtggt
caggacatgaagtacatagccgtcaacgacggggtcatcgattcaatctgcgtcaatgag
gcttgttcggccggttgcgggtccttcctgcagaccttcgcccagtccatgggaatcagc
attcaggaattcaccaggcaggccctggcctccgaggctccgaccgatctggggtcacgt
tgcacggtcttcatgaactcctcggtaaagcaggcccaaaaggagggcgcctccccggag
gacatagccgcaggtctctgctattcggtggtcagaaacgccttatataaggtcatcaag
ttgcgtgatgccaacgccctggggccggttgtggtggtccagggcgggaccttcctcaac
gatgccgttctgcgagccttcgagctgctgactggtcgcaaggtcaccagacccaatatc
gccgggctcatgggggcctacggagccgcactgacggcgcgcatgcactgccctcagaat
gaggagatcgaagatatcgtcgcggcgggtccccgcatggcccacccatccttaggggtg
gctgacggggatggggccaagggggtcacgcccaccaccgtcaacaaggccccggttcct
gtccgggcacagctgtcgcaggcttcggtcaacaggatcgaatcccggggttccgatagc
gggcgctcccaggtaccgccgagcgccgggtccaagaacgagcaagggttcaaatcgact
ttgcccggcatccaggtcgatgagggccatgtggtcagttccatcctggccggggatcag
ctggacaacctctccatgaccaccacccatgatgtctgcaagctctgccagaaccactgc
aagctgaccatcaccgagttcgaggacggtggccgctacgtaacggggaaccgttgcgaa
cggggcggtgacaagaaccgtaaacgttccgaccgtcccaatctctatgacttcaagtac
aagcgggccttcgcttaccgccgtctgaccccagacaaggccaccaggggcgatatcggc
ataccccgggtattgaacatgtatgaggactaccccttctggttcaccctcctgacctcc
ttgggtttccgagtcatgatttcggggcggtccaaccatgaactcttcgagagcggcatg
gagtcaatcgcctcggagaacatctgctatccggcgaagctggtgcacgggcatatccgc
tccctcctcgacaagggggtcgataccatcttctacccctgcgtcacctatgaacaggag
ctggtgcctgaaacggacaaccattacaactgccccatcgtggccaactacccggtggtg
attgaggccaatgtggccgagctcaaggaggatggcgttcggttcatgcggccctacttc
aacctgtccaacaaggagaagatggtcgagcggatcgtcaaggtcttcgattgggccggg
gtgggcgaggaggaggcccgaatcgccgtccaggaggcctaccgtgaggatgcccgattc
aaggaggatgtccggcaggaggggttgcgggccttggcctacatgcaggagtatggggtc
aagggtgtggtcctgtccggacggccctaccacgtggatcctgaggtcaaccatggcatt
cccgagaccatctgctctctgggcatggctgtgctttccgaggattcgatctgtgagttg
gatgtccatgacctgcccaagctgagcgactacatcattcccgaggcgggggagcgggcc
cttgcctcgaacaaccccacggccgccaagttccgcaagaccgtcccgggctttggcgac
gaccgtcagaagatgcccttgagggtgaccgaccagtgggcctaccattccaggctgtac
tccgctgccgggttcgtctccgagtatcccgacctggaactggtccagctggtcagcttc
ggttgtggcgtggatgccatcaccacggaccaggtccaggagattctggccgacaagggc
gatgtctacacgcagctgaagattgacgaggtctccaatctgggtgcggccaagattcgt
ctgcgctcgctgaaggcagccatggatgaacgtcatcaacgtgatctggatgaggagggg
gagactctttctgctcgggaagtgcctgcgaatacggcagaccgggattccggccttttg
cctgattcgttccatgtgggaaattcagctgattcgccaaattcccaggccattgacggc
cgtactgaaacaggtggggcgggtacaggcgagcggtcgaaatccgacaggttcagatcg
accaacgcccagagaattagtctgtcggagcagaaggccgacatcgtgggcctggcccgg
ttcgtcgccctgcatgacaagagcgatcagggtctggtaggccttcatcccatgggcatc
cggcccatccgagagaccagggcctcgcagcacaagggggctgagaagaaacaggcggag
ggtgatggcgaacagggcccgggcgttcagaatggcggagccgcagcaaaaccgaccctg
tccaagtatgccaccgagcatcgcttcaccaaggcgatggggcataaatacacggtggtg
gcaccgcagatgtcacctgtgcacttctccctcctggaatcggtcttctccagtgcggac
tatcatttcgagcttctgaagcacgcctcggccgaggacatcaacaccggggtcaagttc
gtcaacaacgatgcctgcttccctgcgatcatcgtggtgggtcagctggtcaacgccttc
ctctccggtaagttcgacccccataaatgtgcggtcatcgttacccagaccggcggcatg
tgcagggccaccaactactacggtctgctccgcaaggccctggctgatgccggatacggc
tatgtgccgatcatcacgctgagcgttcaggggttccgggccaatcccggtcttcaagtg
accccggccctgctgcaccgtgccgtcaaggccttctacctgggcgacgccatgatagag
tgcctgctcagggtccgtccttatgagcaggagcccggctcggccaacaggctgtacaag
ctctgggacacgatctgcagggagaccatcgagcatcatggttactccaggaccgccaag
aaggtatacggccgtggctgtctgccctatggcacgctgatgaagcggatgattcaggcc
ttcgaccagctgccccttcgcgggattccccgcaagccccgggtgggcgtggtcggtgaa
atcctggtcaagtaccatccggacgccaacaaccacgtggtcgacctgattgagagtcag
gggtgcgaggccgtgttgcccggagtctgcgacttcatggtcaacggcatctccaatgcc
gaatggaacgaggagatgctgggaaccggcggccaggtaggcatcaagaaggtcgtgctc
aaggctgcggacgcctaccgggcccccatgattgccggattcagggcctccagggggaag
ttcgatattccggcccacatcagcgagttgcgggagaaggcggcctcggtcacctcgctg
ggggtccaggccggtgagggttggctcctgaccggtgagatcatcgagctgattcagtcc
ggtgcacccaacatcgtctgtgcccagcccttcgcctgcctgcccaatcatgtgaccggg
cgtggtatgttcggcaagatccgcaggtcctatccagaggcaaacatcgtctccatcgac
tatgaccctggggcatcggaggccaaccagctcaaccggatcaagctgatgatcgccgca
gccaagaaacagggtgaccaggagaaggttccggataggccgtag
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integrated database retrieval system
