Bifidobacterium coryneforme: BCOR_0412
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Entry
BCOR_0412 CDS
T03236
Name
(GenBank) DNA helicaseII-like protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bcor
Bifidobacterium coryneforme
Pathway
bcor03420
Nucleotide excision repair
bcor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bcor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BCOR_0412
03430 Mismatch repair
BCOR_0412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcor03400
]
BCOR_0412
Enzymes [BR:
bcor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BCOR_0412
DNA repair and recombination proteins [BR:
bcor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BCOR_0412
MMR (mismatch excision repair)
Other MMR factors
BCOR_0412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
DUF6771
Motif
Other DBs
NCBI-ProteinID:
AII74430
LinkDB
All DBs
Position
544255..545763
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AA seq
502 aa
AA seq
DB search
MHEDQEKLLGGLDRFQREAVTSLDGPVRIIAGAGAGKTRTITHRIAYACAQGSWDPSKTM
AVTFSVKAAAEMRSRLTALGVPESVKAATFHSAAFQQLRQVWPQVSSSYPPTLIQDLRPL
VRAAYKRVCGQEEADPGQVRDLEAEINWAKVGLIAPKEYVRVCAATHRTPPAGLDPDRMA
DLYEAFEYDKSAHNQMDFNDILLLVCHILEEEPEAAAVIRSRIRWMTVDEYQDVSPLQHR
LLRLWLDDRDNLCVVGDPAQTIYSFAGATSYYLLDFPEEYPSMKADLQLNTDYRSTPQVV
NYANRVLSKSPNRGDYLKLKSNREAGKRIGTTRYQDDVEEAHGVAKRIERLIHGGADPGQ
CAVLTRINAQQTAICAALHERGIPYRLRTDSGWLDQSVSEVTAVQSSEKTIEDFQQARAR
GQVTVSTIHAAKGLEFSHVFLVGCSEGLLPFGSPREGEDLEEERRLMYVAVTRAEDTLHL
SFAEKKDPASFARRTPSRFVQG
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
gtgcatgaagatcaggagaagctcctaggggggctggaccggttccagagggaggcggtc
accagtttggacgggccggtcaggatcatagccggggcaggtgccggaaagacccgaacc
atcacccaccggattgcttatgcctgtgcccagggtagttgggacccgtcgaagaccatg
gccgtcaccttttccgtcaaggctgctgccgagatgcggtccagactcaccgccctcggt
gtgccggaatcggtcaaggccgccacattccactcggcggccttccagcagctccgtcag
gtctggcctcaggtcagctcctcatatccacccaccctgattcaggatctccgccccctg
gtcagggccgcctataagcgggtctgtggtcaggaggaggccgatccgggccaggtccgc
gatttggaggcggagatcaactgggccaaggtgggcttgattgcccccaaggagtatgtc
cgggtttgcgcagccacacaccgcactccgccggcgggtctcgaccccgataggatggcc
gacctctacgaggccttcgaatatgacaagtccgcccataatcaaatggacttcaacgac
atcctcctcctggtctgtcacatcctggaggaggagccggaggcggcggccgtcatccgg
tcgcgcattcgctggatgacggtcgacgagtaccaggatgtgtcacccctgcagcaccgc
ctactgaggctctggttggatgaccgcgacaatctctgcgtcgtgggagaccccgcccag
accatttattcctttgccggggcaacctcttactacctgttggatttccccgaggagtac
ccgtcgatgaaagccgacctgcagctcaacacggactaccggtccaccccccaggtggtc
aactatgccaatagggtcctttccaagtcccccaatcgtggcgactacctgaaactgaaa
tcgaacagggaggccggcaagcgcattgggaccacccggtatcaggatgatgtcgaggaa
gcccatggggtggctaagcgtatagagcggctcatccatggtggagccgatccggggcag
tgcgcagtgcttaccagaatcaacgcccagcagacggctatatgtgcagccctgcatgaa
cggggcattccataccgcctacggaccgactcgggctggctggaccagagtgtatccgag
gtgacggctgtccagagcagtgagaagacgatagaggattttcagcaggccagggcgcgt
ggtcaggtcaccgtttccaccattcacgccgccaagggactggaattcagccatgtcttc
ctggttggctgttccgaggggcttcttcccttcggttcgccgagggagggggaggacctg
gaagaagaacgcaggctcatgtatgtggcggtgaccagggctgaggacaccctccatctc
tcgttcgccgagaagaaggatcccgcctcgttcgccagacgtacccccagtcgcttcgtg
caggggtaa
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