Bifidobacterium coryneforme: BCOR_0702
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Entry
BCOR_0702 CDS
T03236
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
bcor
Bifidobacterium coryneforme
Pathway
bcor03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bcor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BCOR_0702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcor03400
]
BCOR_0702
DNA repair and recombination proteins [BR:
bcor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BCOR_0702
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BCOR_0702
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
RsgA_GTPase
nSTAND1
AAA_21
AAA_23
AAA_33
DnaJ_CXXCXGXG
nSTAND3
AAA_22
APS_kinase
Cytochrome_C7
Cytochrom_c3_2
Mtrc-MtrF_II-IV_dom
NACHT
cobW
Viral_helicase1
SLFN-g3_helicase
BCA_ABC_TP_C
T2SSE
FtsK_SpoIIIE
Septin
Motif
Other DBs
NCBI-ProteinID:
AII74714
LinkDB
All DBs
Position
complement(891805..894822)
Genome browser
AA seq
1005 aa
AA seq
DB search
MNQKQQARTAVEPAIEQPKMIESNGSLVADLSQVPNDRKIVIQGARAHNLKNVNLTVPRN
RMVVFTGLSGSGKSSLAFDTLFAEGQRRYVESLSSYARQFLGQMDKPDVDFIEGLSPAVS
IDQKTTNRNPRSTVGTITEIYDYLRLLFARTGIPHCPVCGEEVRAQSPQQIVDNLLGKPE
GTRFQILAPIAKGRKGEFVETLELLRSDGYSRAIIDGEMRQLSEKIKLAKQKKHTIEVVV
DRLVIKPAARQRLTDSVETALRLAKGTIVVDFVDLDEKDPGRRQPFSEKRSCPNGHELEL
DEIEPRTFSFNAPYGACPACTGLGFSLEIDPELVVPDPDKSLKDGAIEPWNGTKTQQQFY
GHLLEALAKEMGFSMKTPWKDLSEEVRHAVMYGHDFKVNVSYRNRWGRLREYSTGFEGVV
RTLMRRHDETESEPMKQFYESYMREVPCQVCHGKRLKPEVLAVTVDGLSIAGVCDMPIAK
SLAWVNGLHLEGAMAKIAGEVLKEIKARLRFLSDVGLNYLTMSRAAATLSGGEAQRIRLA
TQIGSGLVGVMYVLDEPSIGLHQRDNDRLISTLQRLRDLGNTLIVVEHDEDTIRQADWLV
DIGPGAGEHGGEVIFSGRSGDLTKATRSVTGDYIAGRRRIEVPKARRRIRKTKQLTVVGA
RENNLKDLKVSFPLSVMTVVTGVSGSGKSTLVNSILYPVLADKLNNARIVPGKHTRVEGV
DQLRKVIHVDQNPIGRTPRSNPATYTGVWDKIRQLFAQTPEAKVRGYGPGRFSFNVKGGR
CETCHGDGTIKIEMNFLPDVYVQCETCHGKRYNRETLEVTYNGKNVSDVLDMPIEEAARF
FQPYTSIARYLNTLVEVGLGYIRLGQPAPTLSGGESQRVKLATELQKRSDGKTVYILDEP
TTGLHFEDVSKLLRVLHGLVDKGNSVIVIEHNLDVIKTADWIIDLGPEGGDGGGTVVAQG
TPEEVAANPDSWTGRYLKPMLDAGKVAQTSKTSKGAGKTKPKSTK
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcagaaacagcaggcaagaacagcggtcgaaccggcaatcgaacagccgaagatg
atcgaatccaacggatcattggtggcggatctctcccaggttcccaacgaccgcaagatc
gtcattcaaggcgctcgcgcacacaacctcaaaaacgtcaacctgaccgtaccccggaac
agaatggtggttttcaccggcctgtcaggatcgggcaagtcctccctggccttcgacacc
ctcttcgccgaggggcagcgcaggtacgtggagtccctgtcctcatacgcccgccagttc
ctagggcagatggacaagcccgacgttgacttcatcgagggactgagcccagcggtttcc
atcgaccagaagaccaccaatcgcaatccccgctcgacggttggaaccattaccgagatc
tatgactacctgcggctcctcttcgcccgtacgggcatcccgcactgcccggtctgcggt
gaggaggtacgggcgcaatccccgcaacagattgttgacaacctcctgggcaagccggaa
ggaacgcgcttccagattctggcccccattgccaagggccgcaagggcgaattcgtcgag
acactggaactgctgcgttcggatgggtactcccgggcaatcatcgacggcgagatgcgc
caactttccgagaaaatcaaactggccaaacagaagaagcacaccatagaggtggtggtt
gaccgcctggtcatcaagcctgcggcccgacagcgcctgaccgactccgtggaaacggcc
ctccgccttgccaagggaaccattgttgtcgacttcgtggatcttgacgagaaggaccct
ggccgacgtcagccattttccgagaaacgttcctgccccaacggacatgagctggagctg
gatgagatcgagccccgcaccttctccttcaatgccccctatggtgcctgcccggcctgc
acaggtctgggtttcagcctggaaatcgaccctgagcttgtcgtaccggatccggacaag
agcctcaaggatggggcgatcgagccctggaacgggaccaagacccagcagcagttctac
gggcacctcctggaagcccttgccaaggagatgggcttctccatgaagacaccgtggaag
gacctttccgaggaggttcgtcacgcggtcatgtacggacatgatttcaaggtcaacgtc
tcctacaggaaccgctggggccgcctgcgcgaatactccaccggtttcgagggtgtggtg
cgtaccctcatgcgtcgtcatgacgaaacggaatcggaaccgatgaaacagttctacgag
tcctacatgcgtgaggtgccctgccaggtttgccatggcaagcgtctcaagccggaagtc
ctcgctgtgaccgtcgacgggctctcaatcgctggagtctgtgacatgcccatagcaaag
agcctggcctgggtcaacggcctgcatctggagggtgccatggccaagatcgccggggaa
gtcctcaaggaaatcaaggcgcggttgcgtttcctgagcgacgtgggtctgaactacctg
accatgtcgcgagctgccgcaaccctatccggaggagaggcacagcgtatccgcctggcc
acccagatcggttccggcctggtcggggtcatgtacgtcctggacgagccgtcgatcggc
cttcaccagcgcgacaacgaccgactcatcagcacacttcagcgtttacgcgacctgggc
aacaccctgattgtggtcgaacacgatgaggacacgatccgccaggccgactggctggtc
gatatcggtccaggcgccggcgagcatgggggcgaggtcatcttctcgggccgatccggg
gacctgaccaaggccacccggtcggtcaccggcgactacatcgccgggcgcagacgtatc
gaggtgcccaaggcgcgtcgcaggattcgcaagacaaagcaactgactgtggtcggtgcc
cgtgagaacaacctgaaggatctgaaggtgtccttccctctgagcgtcatgaccgtggtc
accggtgtatcaggttcgggcaagtccaccctggtcaattcgatcctctacccggtcctg
gcagataagctcaacaacgcccggatcgtcccgggcaagcacaccagggtagagggtgtg
gatcagctgcgtaaggtcatccacgtggaccagaacccaataggacgaaccccgcggtcc
aacccggccacgtataccggagtctgggacaagatacgtcagctcttcgcccaaacaccg
gaagccaaggtgcgtggctacggacccggtcggttctccttcaatgtcaagggtggtcgt
tgcgagacatgccacggagatgggaccatcaagatagagatgaacttccttccggatgtc
tatgtccagtgcgagacatgtcacggaaagcggtacaaccgtgagacgctggaggtgacc
tacaacggaaagaacgtctcggatgtgcttgatatgcccatcgaggaggcggcccggttc
ttccagccctacacctccatcgcgcgttacctgaacaccctggtcgaggtcgggcttggg
tacatccgtcttggacagcccgcacccaccctttccggtggtgaatcccagagggtcaaa
cttgccaccgagctccagaagcggtctgacgggaaaacggtctacatcctggatgagccc
acgacgggccttcacttcgaagacgtgagcaagctgctcagggttctgcacggcctggtg
gataagggcaactcggtcatcgtcatcgagcacaaccttgatgtgatcaaaaccgctgac
tggatcatcgatctcgggcctgaaggcggcgacgggggaggtacggtcgttgcgcagggg
actcccgaagaggtggcggcaaacccggacagctggaccgggcggtatcttaagcccatg
ctggatgccggcaaggtcgcacaaacctccaagacatccaagggagccgggaagaccaaa
ccaaaatcaaccaaatag
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integrated database retrieval system
