Bifidobacterium coryneforme: BCOR_0776
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Entry
BCOR_0776 CDS
T03236
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bcor
Bifidobacterium coryneforme
Pathway
bcor03420
Nucleotide excision repair
bcor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bcor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BCOR_0776
03430 Mismatch repair
BCOR_0776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcor03400
]
BCOR_0776
Enzymes [BR:
bcor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BCOR_0776
DNA repair and recombination proteins [BR:
bcor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BCOR_0776
MMR (mismatch excision repair)
Other MMR factors
BCOR_0776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
AII74787
LinkDB
All DBs
Position
complement(983345..985996)
Genome browser
AA seq
883 aa
AA seq
DB search
MSEEPDMIQRSAGDLLNGLNDRQAEAVQYRGPALLIGAGAGSGKTRVLTRRIAWILSQFG
AWPSQVLAITFTNKAAAEMRERLGGLIGPVAERMWVSTFHSACVRILRRDGNAIGLRSGF
SIYDTADCERLIKLIGQDLNIDLKRYTPRNILSHISDYKNNLQGWQTRLAEYAPDYKPGE
KGQQIVARFGNEEELYSVVYAEYQHRLAMANAVDFDDLIVRTVELLQKAPMVAQYYHRRF
RYILVDEYQDTNHAQYVLMRELAGVGQGRETHEDVQHMNGFGAPGAPGANAAAIPLGAGS
EGPAWITVVGDSDQSIYAFRGADISNIRDFEKDFPGARTILLEQNYRSTQTILDAANAII
VKNEGRKPKKLWTALGKGEPIVGYAADNAQQEAAWIATEIARLRNEEGIHYSDMAIMYRA
NAQSRALEEALINAGLPYQLVGGTKFYERREIKDALAYLHAIANPEDDVNMRRILNVPKR
GLGARAEAAAATYADLHGTSFWTGVERLDEVEGISTLTSKRMATFRDLIRSLTAFAAEHD
SKPSEIVAEVLDESGLLDELNKSTDPQDASRVENLSQLQSVAAEFEQKTPDASLAGFLET
TALVADSDQLPGIGDDSGKVTLMTLHTAKGLEYPVVFLTGMEQGTFPHSRSLEDATELQE
ERRLAYVGVTRAKQRLYLTRSAVRAQWGQSNEMLPSQFLDDIPESLLDWKRKEAGFERMH
SGWGFGDDDDEFGGFEDEGDGASFGGRAFGGSGTESRSGSSWSRGSSRSGGSSRSSYGSR
GYGSQRGGGSWSSGSRRNGRITTRRSGQGSGLKSKPAAAPAEPRSNGLSIQDFSIGDRVA
HDQYGLGKVVDVQDKGHNSVLTVDFGSEGTKRLMLRLAPIEKL
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaagaaccggacatgatccagcgcagtgcaggggacctgctcaacggccttaac
gacaggcaggcggaggctgtccagtatcggggacccgccctgctgatcggagcaggtgca
ggctcgggcaagacccgcgtgctgacccgccgaatcgcttggatactcagtcagttcggt
gcctggcccagccaggtcctggccatcaccttcaccaacaaggccgccgcggagatgcgg
gagcgtctgggtgggctcattggccctgttgctgagcgcatgtgggtctccaccttccat
tcggcatgtgtcagaatcctcagacgcgacgggaatgccatcggtctgcgttccgggttc
tccatctatgacactgctgattgcgagcggctcatcaagctgatcgggcaggacctgaat
attgacctgaaacggtatacccccaggaacatcctttcccacatctccgattacaagaac
aacctccagggttggcagacccggctggcagagtacgctcccgattacaaacccggcgaa
aagggacagcagatcgttgctcggttcggcaatgaggaggagctctattcggtcgtctat
gccgagtaccaacaccggttggccatggccaatgccgtggactttgacgacctgatagtc
cgaaccgtggaactcctgcagaaggcacccatggtggcccagtactaccatcgtcgcttc
cgatatatcctggtcgatgagtaccaggacaccaaccacgcccaatatgtgctcatgcga
gaactggctggggtaggtcaggggcgggaaacccatgaagatgtacagcacatgaatggg
ttcggtgctcctggggcccctggagcgaacgcggccgccatcccgctaggagcggggagt
gagggtcccgcctggattaccgtggtcggtgattccgatcagtccatctatgccttccga
ggtgcggatatcagcaatatccgcgatttcgagaaggacttccccggagccaggaccatc
cttctggagcagaactatcggtccacgcagaccattctggacgcagccaatgccatcatc
gtcaaaaacgagggcaggaagccaaagaaactctggacagcactgggcaaaggggaaccg
attgtcggctacgcggccgacaatgcccagcaggaggccgcctggattgcgaccgaaatc
gcccgtctccgcaatgaggaaggcatacactactccgacatggccatcatgtaccgggcc
aacgcccagtcgcgggcacttgaggaggccctgatcaatgctggattgccctaccagctg
gtcggtgggacgaagttctatgaacgccgggagatcaaggatgcgcttgcctacctgcat
gccatagccaatcccgaagatgatgtgaatatgaggcgcatactgaatgtgcccaaacgc
ggcctgggtgcaagggctgaggcggcggctgccacctatgccgaccttcatggcacgagt
ttctggaccggggtggagcgcctggacgaggtggagggtatctccacgcttacctccaag
cggatggccaccttccgagatctcatcaggtccctgaccgcctttgccgccgagcatgac
tccaaaccctcggagattgtggcggaggtacttgatgagtcggggttgctggacgagctg
aacaagtcgaccgatccacaggatgcctcccgggtcgagaacctgtcgcagttgcagtcc
gtggcagcggaattcgagcagaagaccccggatgcctccctggccgggttcctggagacc
accgccctggttgccgattccgatcagctgccaggtatcggtgacgattcagggaaggtg
accctgatgacgctccatacggccaagggacttgaatatccagtcgtcttcctcactggc
atggagcagggcacatttccccattcccgaagcctggaggatgcaaccgaactgcaggag
gagcgacgtctggcttatgtcggtgtcacccgagccaaacaacggctctacctgaccaga
tccgccgtccgtgcccagtgggggcagtccaacgagatgctgcccagccagttcctcgat
gatattcccgaaagcctccttgattggaagcgtaaggaggcgggcttcgaacgcatgcac
tcaggctggggctttggcgatgatgacgatgagttcggcgggttcgaagacgaaggtgac
ggagcctccttcggcggcagggccttcggtggaagcggtaccgaatcgcgatcgggatcc
tcctggtcacgtgggtccagtcgctcgggcggttcctcacgcagttcatacgggtccaga
gggtacggttctcagcggggtggtggatcgtggtcttccggttcaaggcggaatggaagg
atcaccaccaggcgcagcggtcagggttcgggattgaaatccaagccagccgcagcgccc
gccgagcccagatcgaacgggctgtccattcaggacttctctatcggcgacagggtggcc
catgatcagtatgggctgggcaaggtggttgatgtccaggataagggacacaactcggta
ctgaccgtggacttcggctccgagggaaccaaacggctgatgctacgcctggcccccatc
gagaagctctga
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