Bifidobacterium coryneforme: BCOR_0893
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Entry
BCOR_0893 CDS
T03236
Name
(GenBank) phenylalanyl-tRNA synthetase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
bcor
Bifidobacterium coryneforme
Pathway
bcor00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bcor00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BCOR_0893
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bcor01007
]
BCOR_0893
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcor03016
]
BCOR_0893
Enzymes [BR:
bcor01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
BCOR_0893
Amino acid related enzymes [BR:
bcor01007
]
Aminoacyl-tRNA synthetase
Class II (U)
BCOR_0893
Transfer RNA biogenesis [BR:
bcor03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
BCOR_0893
Prokaryotic type
BCOR_0893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
AII74903
LinkDB
All DBs
Position
complement(1120132..1122738)
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AA seq
868 aa
AA seq
DB search
MPMVDIDWLKEHVEVPGDLTYPQLAKDLVRVGLEEEEIHQSTVTGPIVVGYVVDATPEPQ
KNGKVINWCHVDVGETYNAVDEDGKKVPRGIVCGAPNMAAGEKVVVTLPGAVLPGDFRIE
PRKTYGHISDGMCASERELGLGSDHNGIILLRQYGFTDQEYEDLKPGDDAMALLHMDNPV
LEINITPDRGYAFSYRGVAREYHHSTGAAYTDPVMELNKALPQAVDQGDQGAVEVRIEDD
GPIHGVPGCDRYYVRTVQGYRAGSATPAWMRRRLTRAGMRSISLPVDVTNYVMLDLGQPL
HAYDADKIEGPIVVRRARQGERLTTLDGKDRELSTEDLLITDSPKGEAGSRILGLAGVMG
GLYGEVTDQTQNILIESAHFDQVTIARSARRHKLPSEASKRFERGVDPQMQPAAAQMAAG
LLQEFGGARIDARPVDVNRTGSAPAIDFDPAQVARLTDLDTDRDQIAAILEDIGCRVESV
DDRTLSVTPPSWRPDLGEACDLVEEVARLVGYDRIPTNIPSAKVTGEVGLTGRQLRKRWV
ADTLAEYGLTEVLDYPFVGRQDLTAFGYDPDQEEAVSVELANPMAADRPFLRRFLMLPLA
NTVARNLRRGNTNVSLFEVGYTFTRDPKAPAVPTLPGGTRPSDEQLAGLDAGLPVQRLHV
AALLTGLAQEDGWLKDRRQVDWTDGVESARRVLDRLGARYHLEQPDADQVPVQWHPGRAA
QVVLDDGTLVGMVGELHPHVIAALDFPDHSAAFELDLDEIFDHLDFEPLQAKPISTFPPV
RQDLAFTVPESVTADQLTSAIREAAGTSLESIELFDVFTGDQIGQDAKSLAFAVTFRAPD
KTLTSEDSEALRGAIVAKASELGAQLRA
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgccgatggtagatattgattggctcaaggaacatgtcgaggttcccggtgatctgacc
tatccgcaactggccaaggacctggtccgggttggtcttgaggaggaggagatccaccag
tccacggtgaccggacccatcgtggtcggttacgtggtcgatgccacccccgaaccccag
aagaatggcaaggtcatcaactggtgccatgtcgacgtgggtgagacctacaacgccgtt
gatgaagacgggaagaaggttccgcggggcattgtctgcggtgcccccaacatggccgcc
ggtgaaaaggtcgtcgtgaccctgccgggtgcggtccttcccggtgatttcaggatcgag
ccgcggaagacgtatggccacatctcggatggcatgtgtgcctcggagcgtgagttgggg
ctcggctcggaccacaacggcatcatcctcctgcggcagtatgggttcaccgatcaggag
tacgaggacctcaaaccgggcgatgatgccatggccctgctccacatggacaatccggtt
ctggagatcaacatcacccccgaccggggttatgccttctcctaccgtggagtggctcga
gaatatcatcactcaaccggtgccgcctatacggatccggtcatggaattgaacaaggcc
ctgcctcaggcggtcgaccagggtgaccagggagccgtcgaggtgcggatcgaggatgac
ggccccattcacggtgtgccgggatgcgaccgctactacgttcgtacggtccagggctac
cgagccgggtccgccacccccgcttggatgcgtaggcggttgaccagggccgggatgcgc
tccatttcacttcccgtggatgtgaccaattacgtcatgctggacctgggccagcccctg
cacgcctacgatgcggacaagatcgaaggtcctattgtggttcgcagggccaggcaggga
gaacgtctgaccaccctcgacggcaaggaccgtgagctgagcaccgaggacctgctgatt
accgattcgcccaagggcgaggccggttcccgaatccttggactggccggtgtcatgggc
ggtctctacggagaggtgaccgaccagacacagaacatcctgatcgaatcggcccacttc
gaccaggtgaccatcgcccggtcggcccgtcgtcacaagctgccctccgaggcttccaag
cgcttcgaacgtggggtggacccccagatgcagcctgctgctgcgcagatggcggccggg
cttttgcaggaattcggaggcgccaggattgacgccaggcccgtggatgtgaatcggacc
ggttccgcgccggcgattgatttcgatcctgcccaggtggcccgactgacggatctggat
acggaccgtgaccagatcgccgccattctggaagatatcggctgccgggtcgagtctgtc
gatgaccggaccctgtccgttacgccgccctcatggaggcccgacctgggcgaggcatgc
gaccttgttgaagaggtggcccgtctggtcggttatgacaggattccgaccaacatcccc
tctgccaaggtcacgggtgaagtgggtctgacgggccgtcagctccggaagcgctgggtg
gccgataccctggctgaatatgggctgaccgaggtactggactatccattcgtcggcagg
caggacctgacggccttcggctacgatcccgaccaggaggaggcggtcagtgtcgaactg
gccaatcccatggccgctgaccgtccattcctgaggcgattcctcatgctgcccctggcc
aataccgtggcccggaacctgcggcggggcaacaccaacgtctcgctcttcgaggttgga
tacaccttcacccgcgatcccaaggctccggctgtgccgaccctgcctgggggcacccgt
cccagtgacgagcagctggccggtttggatgccggactgccagtgcagcggttgcacgta
gccgccttgctgacgggtctggcccaggaggatgggtggctcaaggacaggcgccaggtg
gactggaccgacggtgtcgaatcggcccgccgggtcctggaccgtcttggtgcccggtac
cacctggagcagccggatgccgaccaggtccccgttcagtggcatcctggccgtgccgcg
caggtggtccttgatgatggaacgctcgtgggcatggtcggagaactccacccgcatgtc
attgcggccctggacttccccgatcactccgcggccttcgagctggatctggatgagatc
ttcgatcatctggacttcgagccacttcaggccaagcccatttcgaccttcccgccggtc
cgtcaggacctggccttcacggtcccggaatcggtcacggccgatcaactgacttccgcc
atcagagaagccgcggggactagtcttgagtccattgagctcttcgatgtctttaccggc
gaccaaatcggtcaggatgccaagtccctggccttcgcggtcaccttcagggctccggac
aagaccctgacatcggaggacagcgaggcgctgaggggtgccatcgtggcgaaagcctcg
gagcttggcgcgcagttgcgcgcctga
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