Bifidobacterium coryneforme: BCOR_0929
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Entry
BCOR_0929 CDS
T03236
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bcor
Bifidobacterium coryneforme
Pathway
bcor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BCOR_0929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcor03400
]
BCOR_0929
Enzymes [BR:
bcor01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BCOR_0929
DNA repair and recombination proteins [BR:
bcor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BCOR_0929
Prokaryotic type
BCOR_0929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AII74939
LinkDB
All DBs
Position
1170721..1171509
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AA seq
262 aa
AA seq
DB search
MSTDQSSPTPSGEPAPSSPDTRQAVKEGQGNTRRKPLGELVDPGWAKALAPVEPNIHHMG
DFLRQELAQGHRYLPASRNILRAFTIPFDSIKVLIVGQDPYPTPGNPVGLSFCVDPAVSP
IPGSLRNIYTELTDDLGLPTPSNGDLTPWTQRGVMLLNRCLTVQVGKPASHRNKGWEEIT
DEAIRALNDRQDAQGRPLPLVAILWGRQAQSLEPLLTKAAIIKSPHPSPMSARYGFFGSK
PFSKANQALESMGTSPIDWSLT
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagaccagtcatctccaaccccttcgggcgagccggcccccagttcgccagat
acccgccaggccgtcaaggaaggacaggggaacacccgccgcaagcccctgggcgagctg
gtcgatccgggctgggccaaggctctggcccccgtggaaccgaacatccaccacatgggt
gatttcctgcgccaggaattggcacaggggcaccgatacctgccggcaagcaggaacatc
ctccgggcattcacgatcccctttgactccatcaaggttctgatagtcggccaggacccc
taccccacccccggcaatcctgtcggcctcagtttctgcgtggacccggcagtcagtccc
attcccggttcactgcgcaatatttatacggagctgaccgacgacctgggtctgcccacc
ccctccaatggagatctgaccccttggacccaacggggtgtcatgctcctgaaccgatgc
ctgaccgttcaggtgggcaaacccgccagccaccgcaacaagggttgggaggaaatcacc
gatgaggccatcagggccctgaacgaccggcaggatgcccaggggcgaccccttcctctt
gtggccatcctctggggcaggcaggcgcaaagcctggaacccctcctgaccaaggcggcc
atcatcaaatcgccccatcccagccccatgtccgcacggtacgggttcttcggatccaaa
cccttctccaaggccaaccaagcccttgagagcatggggaccagtccgattgactggtcc
ctgacctga
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