Bifidobacterium coryneforme: BCOR_1062
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Entry
BCOR_1062 CDS
T03236
Name
(GenBank) Helicase
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
bcor
Bifidobacterium coryneforme
Brite
KEGG Orthology (KO) [BR:
bcor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcor03032
]
BCOR_1062
03029 Mitochondrial biogenesis [BR:
bcor03029
]
BCOR_1062
Enzymes [BR:
bcor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BCOR_1062
DNA replication proteins [BR:
bcor03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
BCOR_1062
Mitochondrial biogenesis [BR:
bcor03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
BCOR_1062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
AAA_22
Pif1_2B_dom
AAA_16
SH3_13
Viral_helicase1
AAA_5
AAA
nSTAND3
AAA_11
NTPase_1
SLFN-g3_helicase
TrwB_AAD_bind
IstB_IS21
AAA_24
AAA_14
NAT10_TcmA_helicase
MeaB
cobW
ABC_tran
AAA_18
AAA_7
Zeta_toxin
Herpes_Helicase
KdpD
AAA_25
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
AII75069
LinkDB
All DBs
Position
complement(1319846..1321252)
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AA seq
468 aa
AA seq
DB search
MQQSEALTILNAGANVFLTGAPGAGKTYVLNEFVSQARKNGAAVSVTASTGIAATHINGQ
TIHSWSGVGISTSMTESLLRRIKTRRGRQIEGTDILVIDEVSMMHAWLFDMVDQACRAVR
HSPEPFGGIQVVLSGDFFQLPPVTRPNHVGGMIPGPEFQVSRERYAQTGKDPEGFVTESL
VWNDLDPVVCYLTEQHRQDDGQLLTVLTDIREGGVTQEDHDVLATRVGAVPAPGTVAVHL
FPVNRQADALNDQRLAAIGEEAHHYEATSRGETKLVERLKKNMLAPDDLTLKTGAAVMAL
RNDQDHQYVNGSIGTVKGFTSQAKGGWPIVSFQNGNEVTMKPAAWETMDGDTVLAAVNQV
PLRCAWGITIHKSQGMTLDRAVMDLRRTFAPGMGYVALSRVEGLDGLYLAGINEHAFLVS
PDAVVLDADLRANSKAACARLEDEGARSFTKRAVGQAPEDEFSQDQLF
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaatccgaagccctgaccatattgaacgcgggggccaacgtcttcctcaccggt
gcccccggggcgggcaagacctatgttctgaacgagttcgtcagccaggcccgcaagaac
ggggcggccgtatccgtgaccgcctcgacgggcatagcggccacccacatcaatggtcag
accatccactcctggagcggggtgggcatctccacctccatgacggagtctctgttgcgc
cgcatcaagacccggcgcggtcggcagatcgaaggaaccgacatcctggtcatcgacgag
gtctccatgatgcacgcctggctttttgacatggtggaccaggcctgtagggccgttcgc
cacagccccgaaccattcgggggaatccaggtggttctttcaggggacttcttccaattg
ccgccggtgacccggcccaaccatgtgggtggaatgattcccgggcctgaattccaggta
tcgcgggagcgttacgcccagacgggtaaggacccggaggggttcgtcacggaatccctg
gtctggaacgaccttgatccggtcgtttgctatctgacggaacagcaccgtcaggatgat
gggcagttgctgaccgtgctgaccgacatcagggagggcggggtcacccaggaggaccat
gatgtccttgccacacgggtgggtgcagtaccggcgccaggcacggtggcggtgcatctc
ttccctgtcaacaggcaggccgatgccctcaacgatcagcgtctggcggccataggcgag
gaggcccatcactacgaggccacatcgcggggtgaaaccaagctggtcgagcggttgaag
aagaatatgttggccccggatgacctgacgctgaagaccggagctgcggtcatggccctg
cgcaatgaccaggatcatcagtatgtcaatggttcgataggcacggtaaaggggttcacc
agccaggccaaggggggctggccgattgtgtccttccagaacgggaacgaagtcacgatg
aagccggcggcttgggagaccatggacggggacacggttctggccgccgtcaaccaggtt
cccctgaggtgcgcctggggaatcaccatccacaagtcccagggtatgacccttgaccgg
gcagtcatggacctcagacgcactttcgcccccggtatggggtatgtggcgctctctcgt
gtggagggtctggatgggttatacctggctggcatcaatgaacacgccttcctggtttca
ccggatgccgttgtcctggacgcggacctcagagccaattccaaggccgcctgtgcccgg
ctggaggatgagggtgcccggtccttcaccaagcgggcggtcggtcaggctcctgaggat
gagttctcccaggaccagctcttctga
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