Bifidobacterium coryneforme: BCOR_1137
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Entry
BCOR_1137 CDS
T03236
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bcor
Bifidobacterium coryneforme
Brite
KEGG Orthology (KO) [BR:
bcor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcor03016
]
BCOR_1137
Enzymes [BR:
bcor01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BCOR_1137
Transfer RNA biogenesis [BR:
bcor03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BCOR_1137
Prokaryotic type
BCOR_1137
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
Fapy_DNA_glyco
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AII75143
LinkDB
All DBs
Position
complement(1406560..1407696)
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AA seq
378 aa
AA seq
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MKGSGQENRSGIVLVDKPQGVTSHDLVAAVRSTLGMRRVGHAGTLDPMATGLLIIGFGQA
TRLLKVVVGHDKTYLATIRLGQATTTDDAEGRMLPSGPDVRQAVKGLDRAAVERTIADHL
TGDINQVPDSFSAIKVNGRRAYDLARQGKEVELAARPIHIARFEVLDYRTLVLPGKDMGG
VDQQPETGEFDRSSSCEGALPAEAPGSPSGGLEVVDLDVVVTCSSGTYIRALARDLGDLL
GTGGHLTSLRRTRVGRFDLETPDLEDRLVTGQVSARTYTDRQGQTVSRNRVDLDQSSEEI
LRGSISLVDAARLIMPTIEVDGEEAAMLANGRFLKVGVEGATAAIARDETGPYLAAVLVP
HGGQLSKPDVVFRRDSQR
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaagggttccggacaggaaaaccggtctggtattgtcctggtcgacaaaccccagggg
gtgaccagccatgacctggtggcggctgtgcgttccacgctgggcatgcggcgggtggga
catgccggaaccctggaccctatggccacaggcctgctgatcattgggtttgggcaggcc
acccgcctgctcaaggtggtcgtcggtcatgacaagacctatctcgccacgattcgtctg
ggacaggccacaaccaccgacgatgccgagggaaggatgcttccctccgggccggacgtc
cggcaggcggtcaagggtctggaccgtgctgccgtggagcggaccatcgccgaccacctt
acaggtgatatcaatcaggtgcccgattcgttctccgccatcaaggtgaacggccgtcgg
gcttatgatctggccaggcagggcaaggaggtcgagctggcggctcggcccatacacatc
gctcgtttcgaggtgttggattaccgcaccctggtcctgccgggcaaggacatgggcggt
gtcgaccagcagcctgaaacaggtgagtttgataggtcgtcatcctgcgaaggtgcctta
cctgcagaagcacccggtagcccgtcaggcgggctggaagtggtggatctggatgtggtg
gtgacctgttccagcgggacctatatccgtgccttggccagggacttgggtgacctgctg
ggcaccggtgggcacctgaccagtctgcgtaggaccagggtgggtcggttcgatcttgag
actccggacctggaagacaggttggtcaccgggcaggtctcggccaggacctatacggac
cgtcaaggtcagacggtctccaggaacagggtcgatctggaccagtcctccgaggagata
ctgcgaggctccatcagcctggtcgatgctgccaggctgatcatgcccaccatcgaggtc
gatggggaggaggccgccatgctggcaaacggccgcttcctgaaagtgggggtcgagggg
gccacggccgccatcgccagggatgaaacaggcccatacctcgctgccgtcctggtaccc
catgggggccagctgtcgaaaccggatgtcgtcttccgccgtgattcccagcggtga
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