Bifidobacterium coryneforme: BCOR_1314
Help
Entry
BCOR_1314 CDS
T03236
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bcor
Bifidobacterium coryneforme
Brite
KEGG Orthology (KO) [BR:
bcor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcor03032
]
BCOR_1314
03400 DNA repair and recombination proteins [BR:
bcor03400
]
BCOR_1314
Enzymes [BR:
bcor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BCOR_1314
DNA replication proteins [BR:
bcor03032
]
Prokaryotic type
DNA Topoisomerases
BCOR_1314
DNA repair and recombination proteins [BR:
bcor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BCOR_1314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AII75318
LinkDB
All DBs
Position
complement(1611645..1614587)
Genome browser
AA seq
980 aa
AA seq
DB search
MASGNKLVIVESPTKARKIGGYLGKGYTVMASVGHIRDLAQPSQVPASQKKEYGRFGVDV
TDGFKPYYIVDDKKKKTVSELKKALKGADELYLATDEDREGEAIAWHLVQTLKPKVPVKR
MVFHEITPEAIKDSLDHTRDVDADMVDAQETRRVLDRLYGYELSPVLWRKVGPGLSAGRV
QSVATRLIVERERERMAFVRAPYWDLVAEMAARSAADAEDDQPSTFKAQMVQLGDRRLAS
SKDFTSKGQLTETAAKAQVLQMDQAQADRIAEALADQPFTVVGMETRPYRRRPQPPFTTS
TMQQAAGNRLGMSSRAAMRAAQGLYENGYITYMRTDSVTLSQEAIAAARKSVTRVYGSEY
LSAKSKQYVTKTAGAQEAHECIRPAGSSFRRPEDLASVLPPDQLKLYTLIWHRTLASQMA
DATGLTASVRLSAQAGEDGEAIFQASGTVIEFPGFMKAMGYGTEKPKGAAGKRDRAESTD
SEADNGSLPPMKKGDRLKASSVNPDGHETQPPARYTEASLVKTLEAKEIGRPSTYASIIS
TIIDRGYVYERGRALIPSWLAFSVVRLLETNFPRYVDYQFTAQMENGLDMIAHGKEKGKD
WLTRFYFGSGEGAAESTDQAHQGLQEQVAQLGDIDARKINTIEIGDGLQVRVGRYGPYLE
DTADLDAEGNPKRASLPPTMAPDELTPAVGHELIASNAGGPRQLGVDPETGGQVEVRKGR
FGPYVALVDPESQEAEEKKTVASAKSGKGGHAAKSEVPKPKMASLFKTMDPDTVTLEDAL
KLLGLPRTVGTIELVDTKTGQIDQATVTANNGRYGPYLTATKPDGGTETRSLSNEGEIFT
VDQAAAKDLFDQPKYGRRTRGSAKPPLRELGQDPESGKPVTIKDGFYGVYITDGQTNRTL
PKQYTAQSIEPEEAFRLLAEKRAAGPRKRRTKSSGTKSKTARKTTRKATTKTAKTTRAKT
TAARKTTSTRKKSATTEKKA
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggcatccggcaataagcttgtcattgttgagtcgccaaccaaggcaaggaagatcggt
ggatatctgggcaagggatacaccgtcatggcctcggtcggtcatattcgtgacctggcc
cagccctctcaggtgcctgcctcccagaagaaggaatacggcaggttcggggtcgatgtg
actgacgggttcaagccctactacatcgtggacgataagaagaagaaaaccgtttccgag
ctgaagaaggccctgaagggtgccgatgagctgtatctggcaactgatgaggatcgcgag
ggggaggccatcgcctggcacctggtgcagaccctcaagcccaaggtccccgtcaaacgc
atggtcttccacgagataacccctgaggccatcaaggactccctggatcacacccgcgat
gtggacgccgacatggtcgatgcccaggagacccggcgggtgctggaccgcctctacggg
tacgaactctctcccgtgctctggcggaaggtggggcccggcctgagtgcggggcgtgtc
cagtccgtggccacccggctgattgtcgagcgtgagcgggagcgaatggccttcgtccgt
gcgccttactgggatttggtggccgagatggcagccagatcggccgctgacgccgaggat
gaccagccttcgaccttcaaggctcagatggtccaactgggtgaccggcgcctggcatct
tccaaggacttcaccagcaaggggcaactgaccgagacggcagccaaggcccaggtcctg
cagatggatcaggcccaggccgaccggattgccgaagcgctcgcagaccagcccttcacc
gttgtcgggatggagacgaggccctaccggcgcaggccccagccccccttcaccacctcg
accatgcagcaggctgccggtaacagactggggatgagttcccgagctgccatgagggcg
gcccaaggactctacgagaacggttacatcacctacatgcgtaccgattcggtcacgctc
tcccaggaggccatcgcggccgcacgaaagagcgtcaccagggtctacgggtccgaatac
ctctcggccaagtccaagcagtatgtgaccaagacggctggcgcccaggaagcccacgag
tgcatccgtcccgcaggttcgtccttccgacggcccgaagatctggcttccgtcctgccc
cctgaccaactcaagctctacaccctgatttggcacaggaccctggcttcgcagatggcc
gatgccacgggattgaccgcttccgtacgcctatcggcccaggccggtgaggatggggag
gccattttccaagcctccggtaccgtcatcgagttccctggttttatgaaggccatgggg
tacgggaccgagaaacccaagggcgccgccggtaagcgcgacagggccgaatcgaccgat
tccgaggccgacaacgggtccctgccgccgatgaagaagggcgaccggctcaaggcctca
tcggtgaaccccgatggtcatgagacccagcccccggcccgctataccgaagcctccctg
gtcaagacccttgaggccaaggagattggtcggccttccacctacgccagcatcatctcg
accattatcgatcgtggctatgtctacgagcgtggtcgcgcactgattccctcctggctt
gccttctcggtggtcagacttctggagaccaacttcccccggtatgtggactaccagttc
acggcccagatggaaaacggcctggacatgattgcccacggcaaggagaaggggaaggac
tggctgacccgcttctacttcggatccggagagggtgcggcggagagcaccgaccaggcc
caccagggactccaggagcaggttgcccagctgggtgacatcgatgcccggaagatcaac
accatcgaaatcggcgatggactgcaggtccgtgtgggccgctacggcccctacctggag
gatacggccgatttggatgccgaagggaaccccaagcgtgcctcccttcctccgacaatg
gcccccgacgagctgacgcctgccgttggtcatgagctcattgcttccaacgcgggcggc
cccaggcagctgggtgtcgatccggagaccggcggtcaggtcgaggtccgcaagggtcgg
tttggcccctatgtggcccttgtcgatccggagagccaggaggccgaggagaagaagacg
gtcgcatccgccaagtcgggcaagggtggacacgcagccaagtccgaggtccccaagcca
aagatggcctcgctgttcaagaccatggaccccgatacggtgaccctggaagatgccttg
aaactgctcggtctgcccaggacggtgggcaccatcgagctggtcgataccaagaccggg
cagattgaccaggctacggtcactgccaacaacgggcggtatggcccctacctgacggca
accaagccggatggcggtaccgagaccaggtccctgagcaacgaaggcgagatattcacc
gtcgaccaggccgcggccaaggacctcttcgaccagcccaagtatggtcgccgtacccgt
ggaagcgccaagccgcccctccgtgagctgggccaggacccggaaagcgggaagcccgtc
accataaaggacgggttctacggggtctacatcaccgatggacagaccaatcggaccctt
cccaagcagtacacggcccagtccatagagcccgaggaggccttccgtctcctggccgag
aagcgagcggccggtcccaggaagcgtcggaccaaatcatccggaaccaagtccaagacc
gcaagaaagaccaccaggaaggcgacgacgaagaccgctaaaaccactcgcgcgaagacg
accgcggccaggaagaccaccagcacgcgcaagaagagcgcgactacggagaagaaggca
tga
DBGET
integrated database retrieval system
