Bradyrhizobium commune: IC761_05040
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Entry
IC761_05040 CDS
T09283
Symbol
pimA
Name
(GenBank) dicarboxylate--CoA ligase PimA
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bcou
Bradyrhizobium commune
Pathway
bcou00061
Fatty acid biosynthesis
bcou00071
Fatty acid degradation
bcou01100
Metabolic pathways
bcou01212
Fatty acid metabolism
bcou02024
Quorum sensing
bcou04146
Peroxisome
Module
bcou_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bcou00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
IC761_05040 (pimA)
00071 Fatty acid degradation
IC761_05040 (pimA)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
IC761_05040 (pimA)
09145 Cellular community - prokaryotes
02024 Quorum sensing
IC761_05040 (pimA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bcou01004
]
IC761_05040 (pimA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bcou04147
]
IC761_05040 (pimA)
Enzymes [BR:
bcou01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
IC761_05040 (pimA)
Lipid biosynthesis proteins [BR:
bcou01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
IC761_05040 (pimA)
Exosome [BR:
bcou04147
]
Exosomal proteins
Exosomal proteins of breast milk
IC761_05040 (pimA)
Exosomal proteins of breast cancer cells
IC761_05040 (pimA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QPF92654
UniProt:
A0A7S9H0I8
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All DBs
Position
1051752..1053434
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AA seq
560 aa
AA seq
DB search
MTHPGEQFYPEGVHWDDAIPQGTLPDLLSKAAAEYGPRTALEFRDRPITYAGLAAMVERA
AAAFLRAGCGRNTSVALFLGNTPDHPVNFFGALKAGARVAHLSPLDGEIALTHKVSDSGS
RVLVTSNLAALLPTALKFLEKGLIDRLVVCEDDNWGKVGTPQAAIPGDPRIVTFKAFVEG
AAAPTQWPSMTADDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIYDVWGKPARATRGDAI
ERVICVLPLFHIYALTVVLLSSLSRGNLISLHQRFDVEAVMRDIEVKRATYFPGVPTMWI
AIAALPNLDKRDFSSLNAIGSGGAPLPVEIASFFERKVGKKLKSGWGMTETCSPGTGHPP
VGPDKPGSIGLMLPGIELDVVSLDDPTRVLPPGEVGEIRIKGPNVTKGYWNKPKESAESF
SDGRFLTGDIGYVDTDGYFFLVDRKKDMIISGGFNVYPQMIEQAIYTLPGVHEVIVLGIP
DQYRGEAAKAFIKLKPDAKPFSLDELRAELAGKVGKHELPAAVDFVDDLPRTPVGKLSRH
ELRQQQKPSQSTQLASGGRS
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgacccatcccggcgaacagttttatcccgagggcgtgcactgggacgacgcgattccc
cagggcacgctgcctgacctcctgtcgaaagccgcggccgaatacggcccgcgcaccgcg
ctggaattccgcgatcggccgatcacctatgccgggctcgccgcgatggtcgagcgtgcg
gcggctgcgttcctgcgcgccggctgcggcaggaacacctccgtggcgctgttcctcggc
aatacgccggatcaccccgtcaattttttcggcgcactgaaggccggcgcccgcgtcgcg
catctgtcgccgctcgatggcgagatcgcgctgacgcacaaggtctcggactccggctcg
cgcgtgctggtcacctccaacctcgccgcgctgctgccgactgcgctgaagtttttggag
aaggggctgatcgaccgcctcgtcgtctgcgaggacgacaattggggcaaggtcggcacg
ccgcaggccgcgatccccggcgatccccgcatcgtcaccttcaaggcctttgtggagggc
gccgccgcgcctacgcaatggccgagcatgacggcggacgacgtcgcgctgctgcaatat
accggcggcaccacgggtctccccaagggcgccatgctcacccatggcaatctcacctcc
gccgtctcgatctacgacgtctggggcaagcctgcgcgtgcgacgcgcggcgatgcgatc
gagcgcgtgatctgcgtgctgccgctgttccacatctatgcgctcaccgtcgtgctgctg
tcctcgctcagccgcggcaatctgatctcgctccaccagcgcttcgacgtcgaagccgtg
atgcgcgacatcgaagtcaagcgcgcgacctatttcccgggcgtgccgacgatgtggatc
gcgatcgccgcactccccaacctcgacaagcgcgacttctcctcgctcaacgccatcggc
tccggcggcgcgccgctgccggtggagatcgcgagcttcttcgagcgcaaggtcggcaag
aagctcaagagcggctggggcatgaccgagacctgctcgcccggcaccggccatccgccg
gtcggtcccgacaagccgggctcgatcgggttgatgctgcccggcatcgagctcgacgtg
gtctcgctggatgacccgaccagggtgctgccgccgggcgaagtcggcgagatccgcatc
aagggcccgaacgtcaccaaaggctactggaacaagccgaaggaatccgcggagtccttt
tccgacggccgcttcctcaccggcgacatcggctatgtcgacaccgacggctatttcttc
ctggtcgatcgcaagaaggacatgatcatctccggcggcttcaacgtctatccgcagatg
atcgagcaggcgatctacacccttcccggcgtgcacgaggtgatcgtgctcggcattccc
gatcaataccgcggcgaggccgccaaggccttcatcaagctgaagccggacgcaaagccg
ttctcgctcgacgagctgcgcgcggagctcgccggcaaggtcggcaagcacgaattgccg
gccgccgtcgacttcgtcgacgatttgccgcgcacgccggtcggaaaactgtcgcgccac
gaattgcgccagcagcagaaaccgtcacaatccactcaacttgcatcaggaggtcgctct
tga
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