Bradyrhizobium commune: IC761_13920
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Entry
IC761_13920 CDS
T09283
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bcou
Bradyrhizobium commune
Pathway
bcou03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcou00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IC761_13920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcou03019
]
IC761_13920
03009 Ribosome biogenesis [BR:
bcou03009
]
IC761_13920
Enzymes [BR:
bcou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
IC761_13920
Messenger RNA biogenesis [BR:
bcou03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IC761_13920
Ribosome biogenesis [BR:
bcou03009
]
Prokaryotic type
rRNA helicases
IC761_13920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QPF94300
UniProt:
A0A7S9H2X0
LinkDB
All DBs
Position
2945441..2947387
Genome browser
AA seq
648 aa
AA seq
DB search
MSFPTTSPPLARALAERNYDSPTPVQLAVLGDDAVDRDLLVSAQTGSGKTVAYGLAMAKD
LLDDAERFEQAAAPLALIVAPTRELALQVQRELTWLYEHAGARVVSCVGGMDPRREQREL
AAGAHIVVGTPGRLCDHLRRNRLDTSELKVVVLDEADEMLNLGFREDMEFILETTPETRR
TLLFSATFPRGIVALAKQYQQDAFRIEVAGDEGGHADIEYRAIRIAPGDVEHAVVNVLRF
FEAPSALVFCNTRDAVRHLQSALLERGFSVVALSGELTQNERTTALQSLRDGRSRVCVAT
DVAARGIDLPSLDLVIHADLPNDPEVMQHRSGRTGRAGRKGTSVLLVPPVRRRRAEVLLN
LSGIDAVWGTAPQADDIRKLDHERMKDVLFTEETTADDLVLAQALLAERSAEDIAAALAR
LYRARLPSPEDIIDPGERSGRPRDDRHRDDRAPRGDDRSERPRPKSVKSSAKHDMAEPTV
WFRAAIGRRKNAEARWLLPMICRRGGIDKRDIGAIKVMDTTTEFEISERVAASFAAKVKR
PDKEDSIRIEAMADAPQSQAASDKRPHAPRREAREADDRAHRSDHPRAATGPKKPGKPDR
DGGAKFGDGPAFGKKGKHHNKPGHAEPSVTAWPAKGAFGKKAKKKRRG
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctttccgaccacaagtccgccgctcgcccgcgccctggccgagcgcaactacgat
tcaccgaccccggttcagctcgccgtcctcggcgacgatgccgtcgaccgcgatctcctg
gtgtcggctcagaccggctcgggcaagacggttgcttacggattggccatggccaaggac
ctgcttgatgacgccgagcggttcgagcaggccgcagcacctctggccctgatcgtggcg
ccgacccgtgagctcgcgttgcaggtccagcgcgagctgacatggctctatgagcatgct
ggagcgcgcgtggtctcctgcgtcggcggcatggatccgcgccgcgagcagcgcgagctg
gccgcgggcgcccacatcgtggtcggtacgccggggcggctctgcgatcatctgcggcgc
aaccgcctcgacacctcggaattgaaggttgtcgtcctcgacgaggccgacgagatgctc
aatctcggctttcgcgaggacatggagttcatcctcgagaccacgccggagacgcgccgc
acgctgctgttctcggcgacgttcccgcgcggcatcgtggcgctggccaagcagtatcag
caggatgcgttccggatcgaggtcgcgggcgacgagggcggtcacgccgatatcgagtac
cgcgccatccggatcgcgcctggcgatgtcgagcatgccgtcgtcaacgtgctgcgcttc
ttcgaggcgccgagcgcgctggtgttctgcaacacgcgcgatgcggtcaggcatttgcag
tccgcgctgctggagcgcggcttctccgtggtcgcgctgtcaggcgagttgacccagaac
gagcgcacgacggcgctccagtcgctgcgggacgggcgatcccgtgtctgtgtggcgacc
gacgtcgccgcgcgcggtatcgatctgccgagcctcgacctcgtcattcacgccgacctg
ccaaatgatccggaggtcatgcagcatcgctcgggccgcaccggccgcgcgggccgaaag
ggcacaagcgtcctgctggtgccgcccgtacgacggcggcgcgcggaggtgctgctgaat
ttgtccggtatcgacgcggtttggggcacggcaccccaggcggacgacattcgcaagctc
gatcatgagcgcatgaaggatgtgctgttcaccgaggagacgaccgccgacgatctggtg
ctggcgcaggccttgctggccgagcggtcggccgaggacatcgccgcagcactcgcgcgg
ctttatcgcgcgcggctgccgtcgcctgaagacattatcgatccgggcgagcgaagtggc
cggccgcgcgacgatcgtcaccgcgacgatcgcgcaccgcgtggcgacgatcgctccgag
aggccccgaccgaaatcggtgaaatcgtcggcgaagcacgatatggcagagcccaccgtg
tggttccgggccgccatcgggcgccgcaagaatgccgaggcgcgctggctcttgccgatg
atctgccgccgtggcggcatcgacaagcgcgacatcggtgcgatcaaggtcatggacacc
accaccgagtttgagatttccgagcgcgtcgcggcctccttcgcggccaaggtcaagcgt
ccggacaaggaagacagcatccgaatcgaggcgatggcagatgcgccgcagtcgcaggca
gcttccgacaagcggccgcacgcgccgcggcgcgaggctcgcgaggcggatgatcgcgcg
catcgcagcgatcatccgcgtgccgcgacagggccgaagaagccgggcaagcccgaccgc
gacggcggcgcgaaattcggtgacgggccggcgtttggaaagaagggcaagcatcacaac
aagccaggccatgccgaaccgtcggtcacggcgtggcctgcgaagggtgcattcggcaaa
aaggccaagaagaagcgccgcggctga
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