Bradyrhizobium commune: IC761_14485
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Entry
IC761_14485 CDS
T09283
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bcou
Bradyrhizobium commune
Pathway
bcou03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bcou00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IC761_14485 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcou03021
]
IC761_14485 (rpoC)
03400 DNA repair and recombination proteins [BR:
bcou03400
]
IC761_14485 (rpoC)
Enzymes [BR:
bcou01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IC761_14485 (rpoC)
Transcription machinery [BR:
bcou03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IC761_14485 (rpoC)
DNA repair and recombination proteins [BR:
bcou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IC761_14485 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
ApbA_C
DUF2130
Motif
Other DBs
NCBI-ProteinID:
QPF94399
UniProt:
A0A7S9DCE1
LinkDB
All DBs
Position
3056421..3060617
Genome browser
AA seq
1398 aa
AA seq
DB search
MNQEIMNLFNPTTPAQVFDQIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIICEKCSVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRIGLLLDMTLKDLERILYFEYYVVLEPGLTALKDRQLLSEDEYLKAQDEYGQDSFTA
MIGAEAIRELLKGMDLEKLEASLRVEMQETDSDIKHKKLAKRLKIVEAFRHSGNKPEWMI
LTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG
PELRLHQCGLPKKMALELFKPFIYSRLDAKGLSTTVKQAKKLVEKERPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGQPIIVPSQDIVLGLYYVSIMREGLPGEGKLFGDMAELEHALH
AKVIHLHTKIKYRWEGMDETGKISKRWIETTAGRVMLGNLLPRNPRISYEIINKLMTKRE
ISGVIDQVYRHCGQKETVIFCDRIMALGFYNAFKAGISFGKDDMVVPHSKWKIVDTTRTL
AKDFEQQYNDGLITHGEKYNKVVDAWSKATEEIAKAMMKEISSTKKTASGADADINSIYM
MAHSGARGSPAQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLSVLEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVAQDCIITQSDCGTKLGIKMRAIVDAGTVVASLGSRILGRTA
CEDIRDSSGKVIIKRDTLMEESHLDAIHQGGVQEVKIRSALTCELVNGICGKCYGRDLAR
GTPVNHGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLNEQSFVEANFDGKIVIRNKAIA
RNSEGHLVAMVRNMVVAIVDADGTERATHRIQYGARLHVDEGDMVKRGQRIVEWDPYTRP
LLTEVEGTIGFEDLVEGQSISETLDEATGIAKRVVIDWRSTRGGSDLRPAIVVKGKDGKV
LKLARGGDARYMLSVDGILSVDIGAKVQPGDILARVSTESAKTRDITGGLPRVAELFEAR
RPKDAAIIAEIAGTIRFGRDYKNKRRISIEPMDKTDEPREYLIPKGKHIHLQDGDVVEKG
DFIVEGNPAPHDILAVKGIEELAAYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVEIT
DQGDTDMISGEQVDKIEFDALNEKAKEEGKKPATGTPVLLGITKASLQTRSFFSAASFQE
TTRVLTEAAVNGKVDPLEGLKENVIVGRLIPAGTGASMAKIREVAVKRDKMILDEREKQA
SVVPPAPEAEPMALPPAE
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaaattatgaatctcttcaacccgacgacgccggctcaggtcttcgaccag
atccggatctcgatcgcgtctccagagaagattctgtcctggtcctacggcgagatcaag
aagccggagaccatcaactaccgtaccttcaagcccgagcgcgacggcctgttctgcgcg
cgcatcttcgggccgatcaaggattacgagtgcttgtgcggcaagtacaagcgcatgaag
tacaagggcattatctgcgagaagtgctcggtcgaggtcacgctgtcgcgcgtccggcgc
gagcgcatgggccatatcgagctcgcggcgcccgttgcccacatctggttcctgaagtcg
ctgccgtcgcgcatcggccttctgctcgacatgacgctgaaggatctcgagcggatcctc
tacttcgaatattacgtcgtgcttgagccgggcctcaccgcgctgaaggaccgtcagctg
ctgtcggaagacgagtatctgaaggcgcaggacgagtacggccaggattccttcaccgcc
atgatcggcgcggaagcgatccgcgagctgctcaagggcatggacctcgagaagctcgag
gcctccttgcgcgtcgagatgcaggagaccgactccgacatcaagcacaagaagctcgcc
aagcgcctgaagatcgtcgaggcgttccgtcactccggcaacaagccggaatggatgatc
ctgaccgtcgtgccggtgatcccgccggacctgcgtccgctggtgccgctggacggcggc
cgcttcgcgacgtcggacctcaacgacctgtatcgccgcgtcattaaccgcaacaaccgc
ttgaagcggctgatggagctgcgcgcgccggacatcatcatccgcaacgagaagcgcatg
cttcaggaggcggtggatgcgctgttcgacaatggccgccgcggccgcgtcatcacgggt
gccaacaagcgtccgctgaagtcgctcgccgacatgctcaagggcaagcagggccggttc
cgtcagaacctgctcggcaagcgcgtcgactattcgggccgttcggtgatcgtggtcggt
cccgagctgcgcctgcatcagtgcggcctgccgaagaagatggcgctggagctgttcaag
ccgttcatctattcgcggcttgacgccaagggcctgtccaccaccgtgaagcaggcgaag
aagctggtcgagaaggaacggcccgaggtctgggacatcctggacgaggtcatccgcgag
catccggtgctgctcaaccgcgcgccgacgctgcatcgcctgggcatccaggcgttcgag
ccggtgctgatcgagggcaaggcgatccagcttcacccgctggtctgctccgcgttcaac
gccgacttcgacggcgaccagatggccgtgcacgttccgctgtcgctcgaagcgcagctg
gaagcgcgcgtgctgatgatgtcgaccaacaacatcctgcatccggcgaacggccagccg
atcatcgtgccgtcgcaggacatcgtgctcggtctctactacgtctcgatcatgcgcgaa
ggcctgcccggcgagggcaagctgttcggcgacatggccgagctcgagcacgccctgcac
gcgaaggtcatccaccttcacaccaagatcaagtatcggtgggaaggcatggacgagacc
ggcaagatctccaagcgctggatcgagaccaccgccggccgcgtcatgctcggcaatctg
ctgccgcgaaacccgcggatctcgtacgagatcatcaacaagctgatgaccaagcgcgag
atctcgggtgtcatcgaccaggtctaccgtcactgcggccagaaggagactgtgatcttc
tgcgaccgcatcatggcgctcggcttctacaacgcgttcaaggccggcatctcgttcggc
aaggacgacatggtcgtgccgcacagcaagtggaagatcgtcgacaccacccgtacgctg
gcgaaggatttcgagcagcagtataacgacggcctgatcacccatggcgagaagtacaac
aaggtcgtcgacgcctggtcgaaggccacggaagaaatcgccaaggcgatgatgaaggag
atctcctccaccaagaagacggcgagtggagccgatgccgacatcaactcgatctacatg
atggctcactccggtgcccgcggttcgccggcccagatgcgccagctcgccggcatgcgc
ggcctgatggccaagccgtcgggcgagatcatcgagacgccgatcatctcgaacttcaag
gaaggcctctcggttctcgagtacttcaactcgacccacggcgcccgcaagggtctcgcg
gacaccgcgttgaagaccgcgaactccggctacctgacccgtcgtctggtcgacgtcgcg
caggattgcatcatcacgcagagcgactgcggcaccaagctcggcatcaagatgcgcgcc
atcgtcgatgccggcaccgtggtggcttcgctcggttcgcgcatcctcggacgcacggcc
tgcgaagacatccgtgacagctccggcaaggtgatcatcaagcgcgacacgctgatggag
gagagccatctggacgccatccatcagggtggtgtgcaggaggtgaagatccgctcggcg
ctgacctgcgagctcgtcaacggcatttgcggcaagtgctacggccgcgatctcgctcgc
ggcacgccggtcaaccacggtgaagccgtcggcgtcatcgcggcgcagtcgatcggcgag
ccgggcacccagctcaccatgcgcaccttccacatcggcggtgcggcgcagctcaacgag
cagtctttcgtcgaagccaatttcgacggcaagatcgttatcaggaacaaggccatcgcc
cgcaacagcgaaggtcatctggtcgcgatggtgcgcaacatggtggtggcgatcgtcgat
gccgacggcaccgagcgtgcgacgcaccgtatccagtacggcgcgcgcctgcacgtcgac
gaaggcgacatggtcaagcgtggccagcgcatcgtcgagtgggatccctacacccgtccg
cttctcaccgaggtcgaaggaaccatcggcttcgaggatctggtcgaagggcagtcgatc
tcggaaacgctggacgaggccaccggtatcgccaagcgcgtggtcatcgactggcgctcg
acccgcggcggctcggacctgcgtccggccatcgtggtcaagggcaaggacggcaaggtg
ctcaagctcgcccggggcggcgatgcccgctacatgctgtcggtcgacggcattctgtcg
gtcgacatcggagccaaggtccagccgggcgacatcctcgcccgtgtctcgaccgaaagc
gccaagacgcgtgacatcaccggcggtctgccgcgggtggcggaactgttcgaggcacgg
cgtccgaaggatgcggcgatcatcgccgaaatcgcgggcaccatccggttcgggcgcgat
tacaagaacaagcgtcgcatctcgatcgagccgatggacaagaccgacgagccgcgcgag
tacctgatcccgaagggcaagcacatccaccttcaggacggcgacgtcgtcgaaaagggc
gacttcatcgtggaaggcaacccggcgccgcacgacatcctggcggtcaagggcatcgag
gaactcgcggcctatctggtcaacgagattcaggaggtctaccggctccagggcgtgctc
atcaacgacaagcacatcgaggtgattgtccgtcagatgctccagaaggtggaaatcacc
gaccagggcgacacggacatgatctccggcgagcaggtcgacaagatcgagttcgacgcg
ctcaacgagaaggccaaggaagagggcaagaagcccgccacggggacgccggttctgctc
ggcatcaccaaggcgagcctccagactcgctccttcttctcggcggcctcgttccaggag
accacccgcgtcctcacggaagcggcggtcaacggcaaggtcgatccgctcgaaggcctg
aaggagaacgtcatcgtcggccggctgatcccggcgggcaccggcgcctccatggccaag
atccgcgaagtcgccgtgaagcgcgacaagatgatcctcgacgagcgcgagaagcaggcc
tcggtcgtgccgccggcgccggaagcggagccgatggcgctgccgcccgcggaatga
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integrated database retrieval system
