Bradyrhizobium commune: IC761_15765
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Entry
IC761_15765 CDS
T09283
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
bcou
Bradyrhizobium commune
Pathway
bcou03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcou00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IC761_15765 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcou03019
]
IC761_15765 (rnr)
03016 Transfer RNA biogenesis [BR:
bcou03016
]
IC761_15765 (rnr)
Enzymes [BR:
bcou01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
IC761_15765 (rnr)
Messenger RNA biogenesis [BR:
bcou03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IC761_15765 (rnr)
Transfer RNA biogenesis [BR:
bcou03016
]
Prokaryotic type
tRNA degradation factors
IC761_15765 (rnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
S1
Rv3660c_N
OB_RNB
Motif
Other DBs
NCBI-ProteinID:
QPF94633
UniProt:
A0A7S9H2F4
LinkDB
All DBs
Position
complement(3362228..3364582)
Genome browser
AA seq
784 aa
AA seq
DB search
MKPKHDHGFPDRSAIVAFIKAHQGNVGTREIAREFGLKNADRIELKRMLRELADDGTIKK
KRHRISEPDSLPPTLVADITGRDSDGELIASPTEWDEVESGEPPKIRIQMPRRPKPGTVA
GVRDRVLLRVERTDESEGPAYRGHIIKVFDKAKSRILGVFRSLPEGGGRLIPVDKKSADR
ELNIAPTETQGAQDGDLVSVDIIRSRSFGLASGRVKEKLGSVKSEKAISLIAIYAHDIPL
QFSSAAEREAEAAEPANLKGREDWRDVPLVTIDPPDAKDHDDAVHAQADPDPNNKGGFIV
DVAIADVSFYVRPGTALDRDAVDRGNSVYFPDRVVPMLPERISNNLCSLVPGEPRGALAV
RMIIAPDGRKRSHSFHRILMRSAAKLNYAQAQAAIDGRPDDTTGPLLDPILKPLYAAYAC
VKRARDERDPLNLDLPERKILLKSDGTVDRVVVPDRLDAHRLIEEFMILANVAAAEMLEK
KSLPLIYRVHDEPTLEKVHALAEFLETLDVPFAKAGALRPTLFNRVLAQLEGHDYYPLVS
EVVLRAQAQAEYSSENYGHFGLNLRRYAHFTSPIRRYADLVVHRALVRALGLGEGALPDS
ETPESLGEVAAHISLTERRAMKAERETVDRLIAHHLADRIGSTFQGRVSGVTRAGLFVKL
AETGADGLIPIRSLGAEYFNYDESRHALVGTRSRTMYQLGDVVDVRLIEAAPIAGALRFE
LLSSSSETAPHDRRRPGPQRRPSLKAHPGRSPDKKRKPPKPKPGKKKGKGKNKGKGGGQK
GKAW
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccaaagcatgaccatggctttcccgacaggagcgccatcgtcgccttcatcaag
gcacatcagggaaacgtcgggacccgcgaaattgcgcgcgagttcggcctgaagaatgcc
gatcgcatcgagctcaagcgcatgctgcgcgagctcgcggacgacggcaccattaagaaa
aagcgccacaggatttcagagcccgacagcctgccgccgacgctggtcgccgacatcacc
ggccgcgactccgatggcgaattgatcgcctcgcccaccgaatgggacgaggtcgaaagc
ggcgagccccctaaaatccgtatccagatgccgcgccggccaaagccgggcaccgtcgcc
ggcgtccgtgaccgcgtgctgctgcgcgtcgagcgcacggacgagtccgaaggcccggcg
tatcgcggccatatcatcaaggtcttcgacaaggccaagagccgcatcctcggcgtgttc
cgcagcctgcccgagggcggtggacggctgatccccgtcgacaagaagtccgcagaccgt
gagctgaacatcgccccgaccgagacacagggcgcgcaggacggcgacctcgtcagcgtc
gacatcattcgttcgcgaagctttggtctcgcctccggccgcgtgaaagagaagctcggt
tcggtcaagtcggagaaggcgatcagcctgatcgcgatctacgcccacgacatcccgttg
caattctcttccgccgccgagcgcgaagccgaggcagcggagccggccaatctgaaaggg
cgcgaggactggcgcgacgtcccgctcgtcaccatcgatccgccggatgcgaaggatcac
gacgacgctgtgcatgcgcaagccgatcccgatccgaataacaaaggcggcttcatcgtg
gacgtcgccattgccgatgtgagcttctacgtccgtccgggcaccgcgctcgaccgcgat
gcggtcgaccgcggcaattcggtctatttccccgaccgcgtcgtgccgatgctgccggag
cgcatctcgaacaacctctgttcgctggtgccgggcgagccgcgcggcgcgcttgcggtg
cggatgattattgcgcccgacggacgcaagcgctcgcacagttttcatcgcatcctgatg
cgctcggccgcgaagctgaattatgcgcaggcccaggccgcgatcgacggaaggcctgac
gacaccaccggccccctgctcgatccaatcctgaaaccgctctacgcggcatacgcctgc
gtcaagcgcgcgcgcgacgagcgcgatccgctcaatctcgatctgcccgagcgcaagatc
ctgctgaaaagcgacggcaccgtcgaccgcgtcgtcgtgcctgacaggctcgatgcgcac
agactgatcgaggagttcatgatcctcgccaatgtcgcggcggccgagatgctggagaag
aaatcgctcccgctgatctaccgcgtacatgacgagccgacgctggaaaaggtccacgcc
ctcgcggagttcctggagacgctggacgtccccttcgccaaggccggcgcgctgcgcccc
accctgttcaaccgcgtcttggcccagctcgagggccatgactattacccgctggtcagc
gaggtcgtgctgcgcgcccaggcgcaggccgaatactcttccgagaactacggccatttc
ggcctgaacctgcgacgctacgcgcatttcacctcgccgatccgccgctatgcggatctc
gtggtccaccgcgcgctggtccgcgcgctcggccttggcgaaggcgccctgcctgacagc
gagacgccggaatcgctcggcgaggtcgcagcccacatttcgctgaccgaacggcgcgcg
atgaaggcggagcgcgagaccgtcgatcgattgatcgcgcatcaccttgccgaccgcatc
ggctcgaccttccagggccgcgtctccggcgtcacgcgcgccgggctctttgtcaaactc
gctgaaactggcgccgacggattgatcccgatccgatccctcggcgcggaatatttcaac
tatgacgagagccgccacgcgctggtcggcacgcgcagccgcaccatgtaccagctcggc
gatgtcgtcgatgtccggctgatcgaggcagcccccatcgcaggcgcgctgcgcttcgag
ctgctgtcgtcatccagcgagaccgcgccgcacgaccgcaggcgaccgggtccgcaacgc
cgtccctcgttgaaggcccatcccggacgcagcccggacaaaaaacgcaagccgccgaag
ccaaagcccggcaagaagaagggcaagggaaagaacaaaggcaaaggcgggggccagaag
ggcaaggcatggtga
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