KEGG   Bradyrhizobium commune: IC761_16610
Entry
IC761_16610       CDS       T09283                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
bcou  Bradyrhizobium commune
Pathway
bcou03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bcou00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    IC761_16610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bcou03019]
    IC761_16610
Messenger RNA biogenesis [BR:bcou03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     IC761_16610
SSDB
Motif
Pfam: RNase_J_b_CASP RMMBL RNase_J_C Lactamase_B Lactamase_B_2
Other DBs
NCBI-ProteinID: QPF94788
UniProt: A0A7S9DBX5
LinkDB
Position
3526362..3528032
AA seq 556 aa
MARPDELVFAPLGGVGEIGMNLSIYGLGNRHQRSWLAVDLGVSFGDEEHLPGIDLIMPDI
GFLEKERKNLMGLVLTHAHEDHFGAIIDLWPKLQCPIYATKFSAALFEAKCAAERNAPNI
PVTVIPSGGRVDIGPFNVEFIPVAHSIPESHALAIHTEAGTVLHTGDWKIDPTPNIGRPT
DEKRLRELGEEGVLALIGDSTNAVRDGRSPSETEVARTIIDLVKSAKGRVAVTTFASNVA
RIKAVADAAKAADREVVVVGRAMERVVQVARETGYLDGVQNFRSPEVYGHLPQDKVLALC
TGSQGEARAALARIANDDHPEITLNRGDSVIFSSRTIPGNEKAVGAIINNLILQGVEVIT
DRTHLVHVSGHPRRDELRDMIAWTRPQLLIPVHGEALHLHEHAKLARAAGVPRVLVVRNG
DLVKLGPGDPGIIGEVPSGRLYKDGTILEDAKSRAVVERRRMAFSGCAFVAIAMTAQGEL
ADDPEVDLVGIPEKNRAGEPFDDIVFDAVMSTIEGLPRARRRDPDALGESVRRAVRAVIN
EHWGKKPPCLVHVLTV
NT seq 1671 nt   +upstreamnt  +downstreamnt
atggcgaggcccgacgaactggtgtttgcgccgctcggcggtgtcggcgagatcggcatg
aatttgtcgatctacggcctcggcaaccgccaccagcgttcctggttggcagtcgatctc
ggcgtctccttcggcgacgaggagcatctgccgggcatcgatttgatcatgcccgacatc
ggcttcctggagaaggagcgcaagaacctgatggggctggtgctcacgcacgcccatgag
gaccatttcggcgcgatcatcgatctctggccgaagctgcaatgcccgatctacgcgacc
aaattcagcgcggcgctgttcgaggccaaatgcgccgccgagcgcaacgcgccgaacatc
cccgtcaccgtgatcccgtcgggcggacgggtcgacatcggcccgttcaacgtcgagttc
atcccggttgcgcattcgattccggaatcgcatgcgctggcgatccacaccgaagccggc
accgtgctgcacaccggcgactggaagatcgacccgaccccgaatatcggccgtccgacc
gatgagaagcggctgcgcgaattgggcgaggagggcgtgctcgccctgatcggcgattcc
accaatgcggtccgcgacggccgctcgccctcggaaaccgaggtcgcccggaccatcatc
gacctcgtcaaatcggccaagggccgcgtcgcggtcacgacctttgcctccaacgtcgcc
cgcatcaaggcggtcgccgacgccgcgaaggccgccgatcgcgaggtcgtcgtcgtcggg
cgcgccatggagcgcgtggtgcaggtcgcgcgcgagaccggctatctcgacggcgtgcag
aatttccgctcgcccgaggtctacggccacctgccgcaggacaaggtgctggcgctctgc
accggcagccagggcgaagcccgcgccgcgctggcgcggatcgccaatgacgatcatccc
gagatcacgctcaaccgcggcgacagcgtgatcttctcctcgcgcaccattcccggcaac
gagaaggcggtcggtgcgatcatcaacaatctgatcctgcagggcgtcgaggtcatcacc
gaccgcacccatctggtccacgtctccggccacccgcgccgcgacgagctgcgcgacatg
atcgcctggaccaggccgcagctcctgatccccgtccatggcgaggccctgcatctgcac
gagcacgcaaagctcgcccgcgccgccggcgtgccgcgggtgctggtggtccgcaacggc
gacctggtcaagctcggtcccggcgatcccggcatcatcggcgaggtgccctcgggccgg
ctctacaaggacggcaccatcctcgaggacgccaaatcgcgtgccgtggtggaacgtcgc
cgcatggcgttctccggctgcgccttcgtcgccatcgccatgaccgcgcagggcgagctt
gccgacgatcccgaggtcgatctcgtcggcatccccgagaagaaccgggccggcgagccg
ttcgacgacatcgtcttcgatgccgtgatgtccaccatcgagggcctgccgcgtgcgcgc
cgccgcgatccggatgcgctcggtgaatcggtgcggcgcgccgtccgggcggtgatcaac
gaacattggggcaaaaagcccccctgtctggtacacgtcctgacagtctaa

DBGET integrated database retrieval system