Bradyrhizobium commune: IC761_17970
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Entry
IC761_17970 CDS
T09283
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bcou
Bradyrhizobium commune
Brite
KEGG Orthology (KO) [BR:
bcou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bcou03009
]
IC761_17970 (rimO)
Enzymes [BR:
bcou01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
IC761_17970 (rimO)
Ribosome biogenesis [BR:
bcou03009
]
Prokaryotic type
ribosomal protein modification factors
IC761_17970 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
NTPase_1
YajR_YAM
CLP1_P
TRAM
Motif
Other DBs
NCBI-ProteinID:
QPF88444
UniProt:
A0A7S9D0Z3
LinkDB
All DBs
Position
complement(3811425..3812744)
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AA seq
439 aa
AA seq
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MDKAPRISFTSLGCPKALVDSERIITRLRAEGYELARRHDGADIVIVNTCGFLDSAKQES
LSAIGEAMAENGKVIVTGCMGAEPEQIEQAYPGVLSITGPQQYESVLDAVHRALPPAHNP
HLDLVPPQGIKLTPRHYAYLKISEGCNNRCTFCIIPKLRGDLVSRPANDVLREAERLVDA
GVKELLVISQDTSAYGVDLKYAESPWKDRQVRAKFLDLARELGELGAWVRLQYVYPYPHV
DEVIALMNEGKVLPYLDIPFQHASPEVLKAMKRPAAQDKTLARIKRWREECPDLALRSTF
IVGFPGETDADFAYLLDWLDEAEIDRLGCFKYEPVAGATSNAIANPVPEEIKQERYNALM
ARQQKISARRLKRKVGTRQQIIIDEVGPTVAKGRSKADAPEIDGAVYLTSRRPLRVGEIV
AAKIERADQYDLHGSVAGF
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggataaagcgccgcgcatatcattcacgtcactcgggtgtcccaaggcattggtggat
tccgagcgcatcatcacgcgcctgcgcgcggagggctatgagctcgcccgcagacatgac
ggggccgacatcgtcatcgttaacacgtgtggcttcctcgacagcgccaagcaggaatcg
ctctcggcgatcggcgaggccatggccgagaacggcaaggtgatcgtgaccggctgcatg
ggtgcggaacccgagcaaatcgaacaggcctatcccggcgtgctttccatcaccggcccg
cagcaatatgagagcgtgctcgatgccgtgcatcgcgcgctgccgccggcgcataatccg
catctcgacctggtgccgccgcagggcatcaagctgacgccgcggcactatgcgtatctg
aagatctccgaaggctgcaacaatcgctgcaccttctgcatcatcccgaagctgcgcggc
gatctggtctcgcgtccggccaatgacgtgctgcgcgaagccgagcgcctggtcgacgcc
ggcgtcaaggagctgctggtcatctcgcaggacacctcggcctatggtgtcgatctcaaa
tatgccgagagcccgtggaaggatcgccaggtccgcgccaagtttttggatctcgcgcgc
gagctcggcgaactcggcgcctgggtccggctgcaatatgtctatccctacccgcatgtc
gacgaggtcatcgcgctgatgaacgagggcaaggtgctgccctatctcgacatcccgttc
cagcatgcaagccccgaggtgctgaaggcgatgaagcgcccggcagctcaggacaagacg
ctggcgcggatcaagcgctggcgcgaggaatgtcctgacctcgctttgcgttcgaccttc
atcgtcggcttccccggcgagaccgatgccgacttcgcctatctgctcgactggctcgat
gaggccgagatcgaccgcctcggctgcttcaaatacgagcccgtcgccggcgcgacgtcg
aatgcgatcgcaaatccggtgccggaagagatcaagcaggagcgctataacgcgctgatg
gcgcgccagcagaaaatctcggcgcgcaggctgaagcgcaaggtcggcacgcgccagcag
atcatcatcgacgaggtcgggccaaccgtcgccaagggccgctcaaaggccgatgcaccg
gagatcgacggtgcggtttatctgacgagccgccgcccgttgcgcgtcggcgagatcgtc
gccgcgaagatcgagcgcgcggatcaatacgatctgcacggcagcgtcgcggggttctga
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