Bradyrhizobium commune: IC761_21055
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Entry
IC761_21055 CDS
T09283
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
bcou
Bradyrhizobium commune
Brite
KEGG Orthology (KO) [BR:
bcou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcou03016
]
IC761_21055
Enzymes [BR:
bcou01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
IC761_21055
Transfer RNA biogenesis [BR:
bcou03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
IC761_21055
Prokaryotic type
tRNA splicing ligases
IC761_21055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Reg_prop
HTH_17
Motif
Other DBs
NCBI-ProteinID:
QPF89004
UniProt:
A0A7S9D0N9
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All DBs
Position
4448390..4449730
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AA seq
446 aa
AA seq
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MRRSDPYMERARELCLAAGVDPDSRVGEGRGQPAWCSYRDAARQEHLAREASAAASEIAN
LRPQEARFQNAPLKIFGPHEEATIAQMRNCMAVGNVVSGVICADGHLGYAQPVGGVIAYE
KQISISGVGFDIGCGNMAARLDTRFDDIAEIVPTIIRDVAKVISFGVGRANAERAEHALF
DDGDAWRESDMEAYRQKAVSQLGTVGSGNHYVDLMRDEEGFVWIGVHFGSRGLGHTSATR
YLKAAGGKDGMNVPPAVVDEDSELGRRYIAAMQLAGRYAYAGREWVVERVRQIIGGRVTE
SVHNHHNYAWRETHDGRDLWVVRKGATPAFPGQKGFVGGSMGDDAVILEGVDSPEAKASL
YSTVHGAGRLFGRKEAKRRFSRAEMDHWLNERGVTLIGADLDESPMAYRRLPDVLAQHAG
TVKVLHTLRPFAVAMAGDGEFDPWKD
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgatccgatccctacatggagcgcgcccgagagctctgcctcgccgccggcgtc
gatcccgactcgcgcgtcggcgaaggacgcggtcagccggcctggtgctcgtaccgggac
gctgcacgccaggagcatcttgcccgcgaagccagtgctgccgcgagcgagatcgcgaat
ctgcgcccgcaggaggcacgcttccagaatgcgccgctgaaaatcttcggcccgcatgag
gaggcgaccatcgcgcagatgcgcaactgcatggcggtcggcaatgtcgtgtccggcgtc
atctgcgccgacggccatctcggctacgcccagccggtcggcggggtcatcgcctatgag
aagcagatcagcatctccggcgtcggcttcgacatcggctgcggcaacatggcggcacgg
ctcgatacccgcttcgacgacattgcggagatcgtccctacgatcatccgcgacgttgcg
aaagtgatctcgttcggcgtcggccgtgccaacgcggaacgcgccgagcacgcgctgttc
gacgacggcgatgcctggcgcgagagcgacatggaggcctaccgccagaaggcggtgagc
cagctcggcacggtcggctcgggcaaccactatgtcgacctcatgcgcgacgaggaaggc
tttgtctggatcggcgtccacttcggtagccgcggtctcgggcacacctctgcgacgcgc
tacctcaaggccgccggcggcaaggacggcatgaacgtcccgcccgccgtggtcgacgag
gactccgagctcggccgccgctacatcgcggcgatgcaactcgccggacgttacgcttat
gcgggccgtgagtgggtggtcgagcgcgtccgccagatcatcggcggccgcgtgaccgag
agcgtgcacaaccaccacaattatgcctggcgtgagacccacgacgggcgcgatctgtgg
gtggtgcgcaagggcgcgacgcctgcgtttcccggccagaagggattcgtcggcggctcg
atgggcgacgacgccgtcattctcgaaggcgtcgacagccccgaggccaaggcttcgctt
tattcgaccgtgcacggcgccggccgcctgttcgggcgcaaggaagcgaagcggcgcttc
tcgcgcgcggaaatggatcactggctcaacgagcgtggcgtcaccctgatcggtgccgac
ctcgacgagagtccgatggcctatcgccgcctgccggacgtgctcgcgcagcacgccggc
accgtgaaggtgctgcacacgctgcggccgttcgctgtcgccatggccggcgacggcgag
ttcgatccgtggaaggactaa
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