Bacillus cereus Q1: BCQ_4408
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Entry
BCQ_4408 CDS
T00852
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bcq
Bacillus cereus Q1
Pathway
bcq03030
DNA replication
bcq03430
Mismatch repair
bcq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BCQ_4408 (dnaE)
03430 Mismatch repair
BCQ_4408 (dnaE)
03440 Homologous recombination
BCQ_4408 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcq03032
]
BCQ_4408 (dnaE)
03400 DNA repair and recombination proteins [BR:
bcq03400
]
BCQ_4408 (dnaE)
Enzymes [BR:
bcq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BCQ_4408 (dnaE)
DNA replication proteins [BR:
bcq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BCQ_4408 (dnaE)
DNA repair and recombination proteins [BR:
bcq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BCQ_4408 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Flavokinase
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ACM14834
UniProt:
B9J0A4
LinkDB
All DBs
Position
complement(4324102..4327428)
Genome browser
AA seq
1108 aa
AA seq
DB search
MKFVHLQCQTVFSLLKSACKIDELVVRAKELGYSSLAITDENVMYGVIPFYKACKKHGIH
PIIGLTASIFSEEEEKSYPLVLLAENEIGYQNLLKISSSIMTKSKEGIPKKWLAHYAKGL
IAISPGKDGEIEQLLLEDKESQAEEVARMYRSMFGNFYMSLQHHAIQDELLLQEKLPEFT
SRINIPVVATNDVRYINQSDALVHECLLSVESGTKMTDPDRPRLKTDQYYLKSSDEMEAL
FSHVEEAIYNTVEIAERCRVEIPFHVNQLPKFPVPANETNDMYLRRVCEEGLQKRYGTPK
EVHIKRLNHELNVISSMGFSDYFLIVWDFMKYAHENHILTGPGRGSAAGSLVSYVLEITD
IDPIEYDLLFERFLNPERVTLPDIDIDFPDIRRDEMIRYVKDKYGQLRVAQIVTFGTLAA
KAAIRDIARVMGLPPRDIDIFSKLIPSKLGITLKDAYEESQSLREFIQGNLLHERVFEIA
KRVEGLPRHTSIHAAGVIMSQEPLTGSVAIQEGHNDVYVTQYPADALEELGLLKMDFLGL
RNLTLLENIIKFIVQKTGKEIDIRNLPLQDEKTFQLLGRGDTTGVFQLESGGMRNVLRGL
KPNEFEDIVAVNSLYRPGPMEQIPTFIESKHGKRKIEYIHPDLKPILERTYGVIVYQEQI
MQIASKLAGFSLGEADLLRRAVSKKNRDILDQERKHFVQGCLQNGYDETSAEKIYDLIVR
FANYGFNRSHAVAYSMIGYQLAYLKANYTLEFMTALLSSAIGNEDKIVQYIRETKRKGFH
VLPPSLQRSGYNFQIEGNAIRYSLLSIRNIGMATVTALIEEREKKMFEDLFEFCLRMPSK
FVTERNLEAFVWSGCFDDFGVSRTNLWKSLKGALEYANLARDLGDAVPKSKYVQGEELSF
IEQLNKEKEVLGFYLSSYPTAQYVKLAKELEIPTLAQAMRHKKKVQRAIVYITSVRVIRT
KKLQKMAFITFCDQNDEMEAVLFPETYIHFSDKLQEGAIVLVDGMIELRNHKLQWIVNGL
YPLEEMDVYEEKKDASVYVKLPSQYEKKLLNQVTKILFDYSGFAKVLIYYEKEHKMVQLS
RSLSIHPSEECLGALREIVGEENVVVKI
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
gtgaagtttgtgcatttacaatgtcaaaccgtttttagtttattaaaaagtgcttgtaaa
attgatgaacttgtagttagggcgaaagagctcggttattcatcacttgctattacggat
gaaaatgttatgtatggcgtgattccgttttataaagcatgtaagaaacatggtatacat
cctattatcggcttaacagcttctatttttagtgaagaagaagaaaagtcttatccgctt
gtcttacttgctgaaaatgaaataggttatcaaaatttattaaagatttctagtagcatt
atgacgaagtcaaaagaaggtattcctaagaaatggcttgcacattatgcgaaaggatta
attgctatttcaccaggtaaagatggggaaattgaacaattattattagaagacaaagag
agtcaagctgaagaagtagctcgcatgtatcgaagtatgttcggtaatttttatatgagt
ttacagcatcatgcgattcaagatgaactacttctgcaagagaaattacctgaatttacg
agtaggataaatattccagtcgttgcaacaaacgatgtacgctacatcaatcaaagtgac
gcacttgttcatgaatgcttattatctgttgaaagtggaacgaaaatgacggatccagat
aggccgaggctgaaaacagatcaatattatttaaaatcatcagatgaaatggaagcacta
ttttctcacgtagaagaagcgatttataacacagtagaaattgcagaacgttgcagagta
gaaataccgtttcatgtaaatcaattaccgaaattccctgttccagctaacgagacgaat
gatatgtatttacgccgcgtttgtgaagaaggattgcagaaacgttatggtacgccgaaa
gaagtacatataaagcgtttgaatcatgaattaaacgtgatttctagtatggggtttagt
gattatttcctcatcgtctgggattttatgaagtatgcgcatgaaaatcatattttaaca
ggaccaggtcgtggatcggcggctggctcactcgtttcttacgtattagaaattacagat
attgatccaattgaatacgatctattatttgaaagatttttaaaccccgaacgtgtgaca
cttccagatattgatatcgattttccagatataagacgtgatgagatgattcgatatgtg
aaagataaatatggtcagcttcgtgttgctcaaattgtaacgttcggaacgctggcagcg
aaagcagcaattagagatattgcgcgtgtaatggggcttccgccgcgagatatcgacata
ttctcaaaacttatcccatcaaagcttggtataacgttaaaagatgcatatgaggaatcg
caatcactccgtgagtttatacaaggaaaccttctgcatgagcgtgtgtttgaaattgca
aaacgtgtagaaggcttaccacgtcatacgtctattcatgcagctggcgtcattatgagc
caagagccattaacgggaagtgtagccattcaagaagggcataacgatgtgtatgttacg
caatacccggcggatgcattagaagaacttgggttgctcaagatggactttttaggacta
cgtaatttaacgttacttgaaaatattataaagtttatcgtgcaaaaaacagggaaagaa
atcgatataagaaatttaccacttcaagatgaaaagacgttccaattgttaggtagaggg
gatacaacaggtgtattccagcttgaatcaggtggtatgcgaaatgtacttcgcgggtta
aagccgaatgaatttgaagatattgtcgctgttaactcgttatatagaccaggaccgatg
gaacaaattccaacctttattgaatcaaagcatggaaaaagaaaaattgaatatatacat
ccggacttaaaaccgattttagaaagaacatacggtgtaattgtataccaagaacaaatt
atgcaaattgcgtcgaagttagcgggcttctcgctcggagaagcagatttattacgccgt
gcagttagtaaaaaaaatcgtgatattttagaccaggaacgtaagcattttgtgcaaggt
tgtttacaaaatggttatgacgagacatctgcagagaaaatttacgatttaattgtaaga
ttcgcaaattacggttttaaccgaagtcacgctgtagcctacagtatgattggatatcag
cttgcctatttaaaagcgaattatacgttggaatttatgacggcgctattatcgagtgca
attggaaatgaagataagattgtgcagtatatacgagaaacgaagcgaaaaggttttcat
gttttgccgccgtctcttcagagaagtggttacaatttccaaatagaaggaaatgcgata
cgttacagcttactttccattcgaaacatcggaatggctacagtgacagcattaatcgaa
gaacgagagaaaaaaatgtttgaagatttatttgaattttgtctgcgcatgccatcaaag
tttgtaacagagcgaaatttagaggcgttcgtctggtctgggtgttttgacgatttcggt
gtttcgagaacgaatttatggaaaagtcttaaaggagcgttagagtatgccaatcttgca
cgtgatttaggagatgctgttccgaaatcaaaatacgtacaaggagaagagctctctttt
attgaacagttaaataaagagaaggaagtactaggtttttatttatcaagctatccgaca
gcgcagtatgtgaagttagcgaaagaattagaaattccaactctcgctcaggcgatgcga
cataagaaaaaagtacaaagagctatcgtgtacataacaagcgtgagagtgattcgtacg
aaaaagttgcaaaagatggcatttattacattttgtgatcaaaatgatgaaatggaagca
gttcttttccccgaaacgtatatacatttctcagataagttacaagaaggagcaattgtt
ttagttgacggcatgattgagcttagaaatcataagctgcaatggattgtaaatggacta
tatccgttagaagaaatggatgtgtatgaagaaaagaaagatgcgtctgtttacgtgaaa
ttgccgtctcaatatgagaaaaagcttttaaatcaggttactaaaatattgtttgactat
tcgggttttgcgaaagtactaatttattatgaaaaggaacataaaatggtacaattatca
cgaagtttatcgattcatccaagtgaagaatgtttaggagcacttcgtgaaattgtcggg
gaagaaaatgtggttgtgaaaatataa
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integrated database retrieval system
