Bacillus cereus AH187: BCAH187_A0040
Help
Entry
BCAH187_A0040 CDS
T00799
Symbol
holB
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
bcr
Bacillus cereus AH187
Pathway
bcr03030
DNA replication
bcr03430
Mismatch repair
bcr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BCAH187_A0040 (holB)
03430 Mismatch repair
BCAH187_A0040 (holB)
03440 Homologous recombination
BCAH187_A0040 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcr03032
]
BCAH187_A0040 (holB)
03400 DNA repair and recombination proteins [BR:
bcr03400
]
BCAH187_A0040 (holB)
Enzymes [BR:
bcr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BCAH187_A0040 (holB)
DNA replication proteins [BR:
bcr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BCAH187_A0040 (holB)
DNA repair and recombination proteins [BR:
bcr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BCAH187_A0040 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNApol3-delta_C
AAA_22
TIP49
Motif
Other DBs
NCBI-ProteinID:
ACJ79888
UniProt:
B7HPU2
LinkDB
All DBs
Position
36628..37611
Genome browser
AA seq
327 aa
AA seq
DB search
MMKTWEQLSAIQPIGVKMLMNSIAKERISHAYLLEGGKGTGKFATAIQMAKSFLCSQRNG
VEPCHVCTNCKRIDSGNHPNLHIVKPDGLSIKKQQIHDLQEEFSKTGLEANKKVYIIEHA
DRMTANAANTLLKFLEEPSSDTTAILLTEQSHQILNTILSRCQVVTFRPLPTESLIRRLQ
DEGVTTSLSTLAAQLTNSFDEALALCSDEWFAQARALVIKLCEALEKDKASVFFVQEKWG
KHFGEKEQLQQGLDMLLLIYKDLLYVQLGEEDRLVFHEQKEMFESFSYAQKRIVSALFNI
LEAKNRINANVNAQLVFEQLVLRLQEG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagacgtgggagcagctttctgctatacaacccatcggtgtaaaaatgttgatg
aatagcatcgcaaaagagcgtatatcccacgcttacttgttagagggagggaaagggaca
ggaaagtttgcgacggcaattcaaatggcaaagagtttcctctgttctcagcggaatggg
gtagaaccttgtcatgtatgtacaaattgtaagcgaattgattcaggtaaccacccaaac
ttacatattgtaaaaccagacggattatctattaagaagcagcaaattcatgatttacaa
gaagagttttccaaaacaggattagaagcaaataaaaaagtatatattattgagcacgca
gaccgtatgacggcaaacgcagcgaatacactgttgaaatttttagaagaaccaagtagt
gatacaacagctattttacttactgaacaaagtcatcaaattttaaatacgattttatct
cgttgtcaagttgttacatttagaccgttacctacggaatctttaattagaagattacag
gatgaaggtgttacgacatctttatcgacacttgctgcacaactcacaaatagttttgat
gaagctttagctttatgtagtgatgaatggtttgcacaagcacgagctttagtgataaaa
ttatgtgaagcgctcgaaaaagataaagcctctgttttttttgtacaagaaaaatgggga
aaacactttggagagaaagaacaattacagcaaggtttagatatgttactccttatttat
aaggatttattatatgttcaacttggagaagaagatcgtcttgtttttcatgagcagaaa
gagatgtttgaatctttctcctacgctcagaagcgcattgtatcagctctctttaatata
ttagaggcaaaaaatagaatcaacgctaatgtaaatgcgcagcttgtgttcgaacagtta
gtgttgcggttgcaggagggatga
DBGET
integrated database retrieval system
