Eshraghiella crossota: NQ527_11045
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Entry
NQ527_11045 CDS
T08600
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bcro
Eshraghiella crossota
Pathway
bcro03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bcro00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NQ527_11045 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcro03021
]
NQ527_11045 (rpoC)
03400 DNA repair and recombination proteins [BR:
bcro03400
]
NQ527_11045 (rpoC)
Enzymes [BR:
bcro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NQ527_11045 (rpoC)
Transcription machinery [BR:
bcro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NQ527_11045 (rpoC)
DNA repair and recombination proteins [BR:
bcro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NQ527_11045 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
UWO50444
LinkDB
All DBs
Position
complement(2215032..2218715)
Genome browser
AA seq
1227 aa
AA seq
DB search
MPENTNNETYQPITFDSIKIGLASPEKILEWSHGEVIKPETINYRTLKPERDGLFCEKIF
GPSKDWECYCGKYKKIRYKGIVCDRCGVEVTKASVRRERMGHISLAAPVSHIWYFKGIPS
RMGLILDLSPRVLEKVLYFASYIVLDAGDTDLSFKQILSEQEYAAAYEKWGSAFRVGMGA
ESIKELLHNIDLDKDSAELKAELKDASGQKKARIVKRLEVVEAFRESGNKPEWMILDVIP
VIPPDLRPMVQLDGGRFATSDLNDLYRRIINRNNRLARLMELGAPEIIIRNEKRMLQEAV
DALIDNGRRGRPVTGPGNRALKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKI
YQCGLPKEMAIELFKPFVMKELVSSGYCPNVKGAKKKVEKLETEVWDVLEDVIKEHPVML
NRAPTLHRLGIQAFEPILVEGKAIKLHPLVCTAFNADFDGDQMAVHLPLSVEAQAECRFL
LLSPNNLLKPSDGGPVAVPSQDMVLGIYYLTQERPGALGEGKSFKSVNEAILAYENGIIT
LHSKINVRVTKTLEDGTVKSDVINSTLGRFLFNEIIPQDLGFVDRSIPENECKLEVDFLV
RKKELKKILEKVINTHGATKTAEVLDLIKSTGYKYSTRASMTVSISDMTVPAQKKDMLAE
AEATVDKIMKNFRRGLITEEERYKEVVATWFDTDAKLTDALISGLDKYNNIFMMADSGAR
GSNQQIKQLAGMRGLMADTSGRTIELPIKSNFREGLDVLEYFISAHGARKGLSDTALRTA
DSGYLTRRLVDVSQELIIREVDCSEGKEIPGMVVKAFMEGQEVIEGLKDRITGRYLAEDI
VDPETGEILIKKNHMITPKRAEIIEKLGLKEVKIRTVLSCKSHLGVCAKCYGANMATGQQ
VQVGEAVGIIAAQSIGEPGTQLTMRTFHAGGVAGDDITQGLPRVEELFEARKPKGLAIIA
EFGGVAKIVDTKKKREVVVTDPMTGNVKNYLIPYGSRIKIVDGQVLEAGDELTEGSVNPH
DILKIKGVRAVQDYMLREVQRVYRLQGVEINDKHIEVIVRQMLKKIKIENPGDSEYLSGV
TVDVLDFNEMNEKLAEQKLEPAEGTQIMLGITKAALATNSFLSAASFQETTKVLTEAAIN
GKVDPLIGLKENVLIGKLIPAGTGMKRYRDVRLDSDESSEEELSFEEDFEGEDIAENTDN
SPEETAETSESTDNVAEETTEEVNTEE
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaaatactaataacgaaacatatcagccgataacattcgattcaattaagatt
ggtcttgcatcccctgaaaaaattctggagtggtctcacggagaggttattaagccggaa
acaatcaactacagaacattaaaacctgaaagggacggactgttctgtgagaagatattt
ggaccaagtaaagactgggaatgttactgcggtaagtacaaaaaaatcagatataaagga
attgtctgtgaccgttgtggcgtagaagttacaaaggcaagcgttcgtagagagcgtatg
ggacatataagccttgcagctcctgtatcacatatatggtattttaaaggaataccaagc
cgtatgggacttattcttgacctttcaccaagagtacttgaaaaagtattatattttgca
tcatatatagttcttgatgcaggtgatacggatttatcttttaaacagatattgtcagag
caggaatatgcggcagcatacgaaaaatggggttctgcattcagagtaggtatgggtgcg
gaatcaattaaggaattactccacaatatcgaccttgataaagattcagctgaattaaaa
gctgaactgaaggatgcttcaggacagaaaaaagcaagaatcgttaagagacttgaagtt
gttgaggcattcagggaatcaggaaataagcctgaatggatgatacttgatgtcattccg
gtaataccaccggatttaagacctatggttcagctggatggcggcagattcgcaacatca
gacttaaatgatttatatagaagaattatcaacagaaataaccgtcttgcaagacttatg
gaacttggagcacctgaaatcattatccgtaatgaaaaaagaatgcttcaggaagcagtt
gatgcattgattgataacggtagaagaggacgtcccgtaacaggaccgggtaacagagca
cttaagtctttatcagatatgttaaaaggtaaacagggccgtttccgtcagaatcttctt
ggtaagcgtgttgactactctggacgttcggttatcgtagtaggaccggaacttaagatt
taccagtgtggtcttccaaaagaaatggcaatcgaacttttcaaaccattcgttatgaaa
gaacttgtatcaagcggttattgcccaaatgtaaagggtgctaagaaaaaagttgaaaag
ttagagacagaagtatgggatgtattagaggatgtaattaaagaacatccggttatgctt
aaccgtgctcctacactccatagacttggtattcaggcatttgaaccaatacttgtagag
ggtaaggctattaagcttcatccacttgtatgtacagcgttcaacgccgatttcgacggt
gaccagatggcggtacatcttccattgtcagtagaagcacaggcagagtgcagattcctt
cttctctcgcctaataacctcttaaaaccatcagatggtggtcctgtagccgttccttca
caggatatggttctcggtatctattaccttacacaggaaagaccgggagcacttggagaa
ggcaaatcattcaagagtgttaatgaagcaattcttgcttatgagaacggaattattaca
ttacattcaaaaatcaatgtaagagtaactaagacattggaagacggaacagttaagagt
gatgttattaactctacattaggaagattcctctttaatgaaatcattcctcaggatctt
ggatttgtagacagaagtattcctgaaaatgaatgtaagcttgaagttgatttccttgta
agaaagaaagaattaaagaagatacttgaaaaagtaattaatacacatggtgccacaaag
acagctgaagtacttgaccttattaagtcaacaggttacaagtattctacaagggcatcc
atgacagtatcaatttcagatatgacagttcctgcacagaagaaagatatgcttgcagaa
gctgaggcaacagttgataagattatgaagaacttcagaagaggtcttattactgaagaa
gaaagatataaagaagtagtagcaacatggtttgataccgatgcgaaacttactgatgca
cttatttccggacttgacaagtataacaacatctttatgatggctgactcaggtgcccgt
ggttctaaccagcagatcaagcagttagcaggtatgcgtggacttatggcagatacatca
ggtagaactatcgaacttccaatcaagtcaaacttccgtgaaggtcttgatgttctggaa
tatttcatttctgcccatggtgccagaaagggtctttcagataccgcattaagaacagcc
gattcaggatacctcacaagacgtcttgttgatgtatcccaggagcttattatcagagaa
gttgactgctcagaaggcaaagaaattccgggaatggtagttaaagcatttatggaaggc
caggaagtaattgaaggattgaaggatagaatcacaggaagatatcttgctgaagatatc
gtagaccctgaaaccggggaaatcctcattaagaagaatcatatgattactcctaagaga
gcagaaattattgaaaagctcggacttaaagaagttaagataagaacagttctttcatgt
aagtcacaccttggtgtttgtgctaaatgttatggtgccaatatggcaacaggacaacag
gtacaggtcggtgaagcagtcggtatcattgctgcccagtcaatcggtgaacctggtaca
cagcttaccatgagaacattccatgccggtggtgttgccggtgatgatatcacacagggt
cttcctagagtagaagaactttttgaagcaagaaagccaaagggacttgcaattattgca
gaattcggtggcgttgccaagattgttgatactaagaagaaacgtgaagttgttgtcaca
gatccaatgacaggtaatgttaagaattatcttataccttatggttcaagaattaagatt
gttgatggacaggtacttgaagccggtgatgagcttacagaaggtagcgttaacccacat
gatatccttaagattaagggtgtaagagcggttcaggattatatgcttcgtgaagtacag
cgtgtatacagacttcagggtgttgaaattaacgataagcatattgaagtaattgtaaga
cagatgctcaagaagattaaaatcgaaaatcctggtgattctgaatatctttcaggagta
acagttgacgtacttgacttcaatgaaatgaacgaaaagcttgctgaacagaagcttgaa
cctgcagaaggaacacagattatgttaggtattacaaaggcagctcttgctaccaactca
ttcctttcagctgcatctttccaggaaacaacaaaggttcttaccgaagcagcaattaac
ggcaaggtagacccacttatcggtcttaaagaaaacgttcttatcggtaaacttattcct
gcaggtacaggtatgaagagatacagggatgtaagacttgactctgatgagagcagtgaa
gaagaactttcttttgaggaagattttgaaggtgaagacattgctgaaaatacagacaat
tcacctgaagaaacagcagaaacttcagaaagcacagataatgtagcagaagaaaccaca
gaagaagttaatacagaagaataa
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