KEGG   Burkholderia cepacia GG4: GEM_1595
Entry
GEM_1595          CDS       T02205                                 
Name
(GenBank) Rho protein
  KO
K03628  transcription termination factor Rho
Organism
bct  Burkholderia cepacia GG4
Pathway
bct03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bct00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GEM_1595
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bct03021]
    GEM_1595
   03019 Messenger RNA biogenesis [BR:bct03019]
    GEM_1595
Transcription machinery [BR:bct03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     GEM_1595
Messenger RNA biogenesis [BR:bct03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     GEM_1595
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT OB_RNB S1CSD-TOTE-2 ATPase_2 AAA_25 AAA_22
Other DBs
NCBI-ProteinID: AFQ48020
UniProt: A0A9W3K0P2
LinkDB
Position
1:complement(1731623..1732885)
AA seq 420 aa
MHLSELKSLHVSELIEMANGLEIENANRLRKQELMFAILKKRAKTGETIFGDGTLEVLPD
GFGFLRSPEMSYLASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVN
GQPPEASKHKIMFENLTPLHPNKPLSLEREMRGEENVTGRIIDMIAPIGKGQRGLLVASP
KSGKTVMLQHIAHAIKQNHPDVILFVLLIDERPEEVTEMQRSVAGEVIASTFDEPATRHV
QVAEMVIEKAKRLVEMKHDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINL
NKSGTRREEMLIKPEILQKIWVLRKFIHDMDEVEAMEFLLDKIRQTKSNSEFFDLMRRGG
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgcatttatccgagctcaagtctctgcacgtgtccgaactgatcgaaatggccaatggc
ctggagatcgaaaacgcgaaccgcctgcgcaagcaggagttgatgtttgccattctaaaa
aagcgcgccaagacgggagagacgatcttcggcgacggcacgctcgaagtgctgccggac
ggtttcggcttcctgcgctcgccggaaatgtcgtacctcgcgagcaccgacgacatctat
atcagcccgtcgcaaatccgccgcttcaacctgcacaccggcgacacgatcgaaggtgaa
gtccgcacgccgaaggacggcgagcgctacttcgcgctggtaaaggtcgacaaagtcaac
gggcagccgcccgaggcctcgaaacacaagatcatgttcgagaacctcacgccgctgcac
ccgaacaagccgctgtcgctcgaacgcgaaatgcgcggcgaagagaacgtcacgggccgc
atcatcgacatgatcgcgccgatcggcaagggccagcgcggcctgctggtcgcgtcgccg
aagtcgggcaagaccgtgatgctccagcacatcgcacacgcgatcaagcagaaccacccg
gacgtgatcctgttcgtgctgctgatcgacgaacgccctgaagaagtgaccgaaatgcag
cgctcggtcgccggcgaagtgatcgcatcgacgttcgacgaaccggcaacccgccacgtc
caggtcgccgaaatggtgatcgagaaggccaagcgcctcgtcgaaatgaagcacgacgtc
gtgattctgctcgactcgatcacgcgtctcgcacgcgcgtacaacaccgtgatcccggcg
tcgggcaaggtgctgacgggtggtgtcgacgcgaacgcactgcagcgtccgaagcgcttc
ttcggcgcggcgcgcaacatcgaggaaggcggctcgctgacgatcatcggcaccgcgctg
atcgaaaccggcagccgcatggacgacgtgatctacgaagagttcaagggcaccggcaac
atggaagtgcacctcgagcgccgcctcgcggaaaagcgcgtctacccgtcgatcaacctg
aacaagtcgggcacgcgtcgcgaagaaatgctgatcaagcccgagatccttcaaaagatc
tgggtgctgcgcaagttcatccacgacatggacgaagtcgaggccatggaattcctgctc
gacaagatccgccagacgaagagcaactccgagttcttcgacctgatgcgccgcggcggc
tga

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