Burkholderia cepacia GG4: GEM_1595
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Entry
GEM_1595 CDS
T02205
Name
(GenBank) Rho protein
KO
K03628
transcription termination factor Rho
Organism
bct
Burkholderia cepacia GG4
Pathway
bct03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bct00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GEM_1595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bct03021
]
GEM_1595
03019 Messenger RNA biogenesis [BR:
bct03019
]
GEM_1595
Transcription machinery [BR:
bct03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
GEM_1595
Messenger RNA biogenesis [BR:
bct03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GEM_1595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA_25
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFQ48020
UniProt:
A0A9W3K0P2
LinkDB
All DBs
Position
1:complement(1731623..1732885)
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AA seq
420 aa
AA seq
DB search
MHLSELKSLHVSELIEMANGLEIENANRLRKQELMFAILKKRAKTGETIFGDGTLEVLPD
GFGFLRSPEMSYLASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVN
GQPPEASKHKIMFENLTPLHPNKPLSLEREMRGEENVTGRIIDMIAPIGKGQRGLLVASP
KSGKTVMLQHIAHAIKQNHPDVILFVLLIDERPEEVTEMQRSVAGEVIASTFDEPATRHV
QVAEMVIEKAKRLVEMKHDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINL
NKSGTRREEMLIKPEILQKIWVLRKFIHDMDEVEAMEFLLDKIRQTKSNSEFFDLMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatttatccgagctcaagtctctgcacgtgtccgaactgatcgaaatggccaatggc
ctggagatcgaaaacgcgaaccgcctgcgcaagcaggagttgatgtttgccattctaaaa
aagcgcgccaagacgggagagacgatcttcggcgacggcacgctcgaagtgctgccggac
ggtttcggcttcctgcgctcgccggaaatgtcgtacctcgcgagcaccgacgacatctat
atcagcccgtcgcaaatccgccgcttcaacctgcacaccggcgacacgatcgaaggtgaa
gtccgcacgccgaaggacggcgagcgctacttcgcgctggtaaaggtcgacaaagtcaac
gggcagccgcccgaggcctcgaaacacaagatcatgttcgagaacctcacgccgctgcac
ccgaacaagccgctgtcgctcgaacgcgaaatgcgcggcgaagagaacgtcacgggccgc
atcatcgacatgatcgcgccgatcggcaagggccagcgcggcctgctggtcgcgtcgccg
aagtcgggcaagaccgtgatgctccagcacatcgcacacgcgatcaagcagaaccacccg
gacgtgatcctgttcgtgctgctgatcgacgaacgccctgaagaagtgaccgaaatgcag
cgctcggtcgccggcgaagtgatcgcatcgacgttcgacgaaccggcaacccgccacgtc
caggtcgccgaaatggtgatcgagaaggccaagcgcctcgtcgaaatgaagcacgacgtc
gtgattctgctcgactcgatcacgcgtctcgcacgcgcgtacaacaccgtgatcccggcg
tcgggcaaggtgctgacgggtggtgtcgacgcgaacgcactgcagcgtccgaagcgcttc
ttcggcgcggcgcgcaacatcgaggaaggcggctcgctgacgatcatcggcaccgcgctg
atcgaaaccggcagccgcatggacgacgtgatctacgaagagttcaagggcaccggcaac
atggaagtgcacctcgagcgccgcctcgcggaaaagcgcgtctacccgtcgatcaacctg
aacaagtcgggcacgcgtcgcgaagaaatgctgatcaagcccgagatccttcaaaagatc
tgggtgctgcgcaagttcatccacgacatggacgaagtcgaggccatggaattcctgctc
gacaagatccgccagacgaagagcaactccgagttcttcgacctgatgcgccgcggcggc
tga
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