Burkholderia cepacia GG4: GEM_1988
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Entry
GEM_1988 CDS
T02205
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bct
Burkholderia cepacia GG4
Pathway
bct03420
Nucleotide excision repair
bct03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GEM_1988
03430 Mismatch repair
GEM_1988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bct03400
]
GEM_1988
Enzymes [BR:
bct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GEM_1988
DNA repair and recombination proteins [BR:
bct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GEM_1988
MMR (mismatch excision repair)
Other MMR factors
GEM_1988
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AFQ48405
LinkDB
All DBs
Position
1:complement(2160408..2162771)
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AA seq
787 aa
AA seq
DB search
MPDLLANLNPEQYAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQQGYASPPTVLAVTF
TNKAAREMMARLSAMMPIDTRGMWIGTFHGLCNRMLRAHYRDAGLPQTFQILDTADQLSA
IKRLMKAANVDDEKYPPKNVQYFINNAKEQGLRPDKVDASDNFNRKFVELYQAYDQQCQR
EGVVDFPELLLRCYELLAYNAPLRAHYQARFKHILVDEFQDTNKLQYAWLKMLAGGQNAI
FAVGDDDQSIYAFRGANVGNMRDFEDEFRVRNLIKLEQNYRSHGNILDAANQLISNNSHR
LGKNLRTDAGHGEPVRVYEASTDAQEAGWIVEEIRSLINTGMSRSEVAVLYRSNAQSRAI
EHTLMTSGIPYRVYGGLRFFERQEVKHALAYLRLIDNPSDDTAFVRVVNFPTRGIGARSI
EQLTDAARLYDCSMGAAIPYVTGKAGSSLGAFATLIAKMRAETQQMSLPETVEYVVRASG
LADFYQGEREGQDRLENLQELVNAATAFVSEQGYGLDAPARSIPLRAGASAAPALGIDAN
DPSVDVLDPAPLDDPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQDAVQLMTVHAAKGLE
FSAVFITGLEEGLFPHENSVLESDGLEEERRLMYVAITRAKERLYLSFAQSRMLHGQTRY
NVRSRFFDELPEHVLKWLTPKVEAGSRWGGRSDNAGWGRDWFARPGGGSREQIVDAAVSA
PLPAFANKQRAADTGFRVGQQVFHTKFGEGTVTALEGNGADAKAQVKFKRHGEKWLALAV
AKLQAVE
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatctgctcgccaatctgaaccctgaacaatacgccgccgtcacgttgccgaac
gaaccggcgctgatcctcgcgggggcgggcagcggcaagacccgcgtgctgatcacgcgc
atcgcgtggctgatccagcagggctacgcgtcgccgcccaccgtgctcgccgtcaccttc
acgaacaaggccgcgcgcgagatgatggcgcgcctgtcggcgatgatgccgatcgacacg
cgcgggatgtggatcggcacgttccacgggctgtgcaaccggatgctgcgcgcgcattac
cgcgacgccggcctgccgcagacgttccagattctcgacacggccgaccagctgtccgcg
atcaagcggctgatgaaggcggcgaacgtcgacgacgagaaatacccgccgaagaacgtc
cagtacttcatcaacaacgcgaaggagcaggggctccgtcccgacaaggtcgacgcgtcc
gacaacttcaaccgcaagttcgtcgagctgtaccaggcgtacgaccagcagtgccagcgc
gagggcgtcgtcgacttccccgagctgctgctgcgctgctacgaactgcttgcgtacaac
gcgccgctgcgcgcgcactaccaggcgcgcttcaagcacattctcgtcgacgagttccag
gacaccaacaagctgcagtacgcatggctcaagatgctcgcgggtggccagaacgcgatc
ttcgcggtcggcgacgacgaccagtcgatctacgcgttccgcggcgcgaacgtcggcaac
atgcgcgacttcgaagacgaattccgcgtgcgcaacctgatcaagctcgagcagaactac
cggtcgcacggcaacatcctcgatgcggcgaaccagctgatctcgaacaactcgcaccgc
ctcggcaagaacctgcgcaccgacgccggccatggcgagcccgtgcgcgtgtacgaggcg
agcaccgatgcgcaggaggccggctggatcgtcgaggagatccgctcgctgatcaacacc
gggatgtcgcgcagcgaagtcgcggtcctgtatcgcagcaacgcgcagtcgcgtgcgatc
gagcacacgctgatgacgtcgggcattccgtatcgcgtgtacggcggcctgcgcttcttc
gagcgccaggaagtgaagcacgcgctcgcgtacctgcgcctgatcgacaacccgagcgac
gacaccgcgttcgtgcgcgtcgtgaacttcccgacgcgcgggatcggcgcgcgctcgatc
gagcagctcacggacgccgcacgcctgtacgactgctcgatgggcgccgcgattccgtac
gtgaccggcaaggccggctcgagcctcggcgcgttcgcgacgctgatcgcgaagatgcgc
gccgagacgcagcagatgagcctgccggagacggtcgagtacgtcgtgcgcgcgagcggc
ctcgccgatttctaccagggcgagcgcgaaggccaggatcgcctcgagaacttgcaggaa
ctcgtgaacgcggccaccgcgttcgtcagcgagcaaggttacgggctcgacgcgccggcc
cgctcgattccgctgcgcgcgggggcgagcgcggcgccggcgctcggcatcgacgcgaac
gacccgtcggtcgacgtactcgatccggcgccgctcgacgatcccgcgcagaaccccgac
acgatgacgccgctcgcgggcttcctgtcgcacgcgtcgctggaagccggcgacaaccag
gcgcaggccgggcaggacgccgtgcagctgatgacggtgcatgcggcgaaggggctcgaa
ttctcggccgtgttcatcaccggcctcgaggaggggctgttcccgcacgagaacagcgtg
ctcgaatcggacggcctcgaggaagagcgccggttgatgtacgtcgcgatcacgcgcgcg
aaggagcggctctacctgtcgttcgcgcagagccggatgctgcacggccagacgcgttac
aacgtgcgctcgcgcttcttcgacgaattgccggagcacgtgctgaagtggctgacgccg
aaggtcgaggcgggctcgcgctggggcggccgctcggacaacgccggctggggacgcgac
tggttcgcgcggccgggcggcggcagtcgcgagcagatcgtcgacgcggcggtatccgcg
ccgctgccggcgttcgcgaacaagcagcgcgcggccgacaccggcttccgggtcggccag
caggtgttccataccaagttcggcgagggcaccgtcaccgcgctcgaaggcaacggcgct
gatgcgaaggcgcaggtgaagttcaagcggcacggcgagaagtggctcgcgcttgcggtc
gcgaaactgcaggcggtggaatga
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