Burkholderia cepacia GG4: GEM_2910
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Entry
GEM_2910 CDS
T02205
Name
(GenBank) putative exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bct
Burkholderia cepacia GG4
Brite
KEGG Orthology (KO) [BR:
bct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bct03016
]
GEM_2910
Enzymes [BR:
bct01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
GEM_2910
Transfer RNA biogenesis [BR:
bct03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GEM_2910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
3HCDH_RFF
Motif
Other DBs
NCBI-ProteinID:
AFQ49308
UniProt:
A0A9W3K4G1
LinkDB
All DBs
Position
1:complement(3184499..3186589)
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AA seq
696 aa
AA seq
DB search
MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFDKPAAGELMQEADTA
AQQIDLDFLWECAPAEEFAYTALAAEYFGATYGPVERAALVLRLHGSPVYFRRKGRGQYQ
RAPEEQLKMALASLERKRQQALVQAQYEEELKAGKLPEAFAGKVLGMLTRPDKNAIEYKA
LEAAAGARGVSPARLMLDCGGIESPRALHEARFLAEFFPHGTGFPAVTVGPLPDDLPRAD
VEAFSIDDITTTEIDDAFSVEHLSDGRVRIGVHIAAPALGVVRGDAVDAIARARLSTVYM
PGDKITMLPDDVVDVFTLKEGDYRPALSLYIIVNRETQDIVANETRAELVFVKNNLRHNT
LDELVNEETLAAGTGDYPHKDDIAVLWPLAQALFEKRQVARAGYGLKREVQRNTDYNFYV
EGERVSITPRRRGSPLDLIVSELAILANSTWGAFLHDHTVPGIYRSQRGFGAPGPKRTRM
QTSAAPHEGLGVAQYAWSTSPLRRYVDLVNQWQLLACVQHGVTAKLAAPFKPKDADLYAV
VQGFDDTYSAYADYQRRMEYFWCLRWLAQEQKKHVVASVVKGDLVRLEEIPLLLHVPGLG
VHARGTRVLLDVMSLDELTIEASVRLLNVLDAPTVTSGDAADEEEETEGGDDTLVDAQDA
SAESEAEALAESDGVTAEGGEAANANSQASEEGRAS
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttcttcgaggaatcgggcagtttcaaggcgggcagcgtgctgtcgcgccag
ggcgacgcgtttcaggtcgagttgcccggcgggcggcgggcgaaggtgcgcgcaaaggac
gtgctgatcgaattcgacaagccggccgcgggcgagctgatgcaggaagccgatacggcc
gcgcagcagatcgacctggatttcctgtgggaatgcgcgccggccgaggagttcgcgtac
acggcgctggccgccgagtacttcggcgcgacgtacggcccggtcgagcgcgcggcgctg
gtgttgcggctgcacggctcgcccgtctacttccgccgcaaggggcgtggccagtaccag
cgcgcgccggaagagcagctcaagatggcgctcgcgtcgctcgagcgcaagcgtcagcag
gcgctcgtccaggcgcagtatgaagaggaactgaaggccggcaagctgccggaagcgttc
gcgggcaaggtgctcgggatgctgacgcggccggacaagaacgcgatcgaatacaaggcg
ctcgaggccgcggccggcgcgcgcggcgtgtcgccggcgcggctgatgctggactgcggc
ggcatcgagtcgccgcgtgcgctgcacgaggcgcgcttcctcgcggaattcttcccgcac
ggcacgggcttcccggccgtcacggtcggcccgctgccggacgacctgccgcgcgcggac
gtcgaggcgttctcgatcgacgacatcacgacgaccgaaatcgacgacgctttctcggtc
gagcacctgtccgacggtcgcgtgcggatcggcgtgcacatcgcggcgccggcgcttggc
gtcgtgcgcggcgatgcggtcgacgcgatcgcgcgcgcgcgcctgtcgaccgtctacatg
ccgggcgacaagatcacgatgctgccggacgacgtcgtcgacgtgttcacgttgaaagag
ggcgattaccgcccggcgctgtcgctgtacatcatcgtcaaccgcgagacgcaggacatc
gtcgcgaacgagacgcgcgccgaactcgtgttcgtgaagaacaacctgcgccacaacacg
ctcgacgagctcgtcaacgaagagacgctcgcggccggcaccggcgactacccgcacaag
gacgacatcgccgtgctgtggccgctcgcgcaggcgctgttcgagaagcgccaggtcgca
cgcgcgggttacgggttgaagcgcgaagtgcagcgcaacaccgactacaacttctacgtc
gaaggcgagcgcgtgtcgatcacgccgcgccgccgcgggtcgccgctcgacctgatcgtg
tcggagctcgcgatcctcgcgaactcgacgtggggcgcgttcctgcacgatcacacggtg
cccggcatctaccgctcgcagcgcggcttcggcgcgccgggcccgaagcgcacgcggatg
cagacgtcggccgcgccgcacgaaggtctcggcgtcgcgcagtatgcatggagcacatcg
ccgctgcgccgctatgtcgacctcgtgaaccagtggcagctgctcgcgtgcgtgcagcac
ggcgtcaccgcgaagctcgccgcgccgttcaagccgaaggacgccgatctgtacgcggtc
gtgcagggcttcgacgacacctattccgcgtacgccgactatcagcgccggatggagtat
ttctggtgcctgcgctggctcgcgcaggagcagaagaagcacgtcgtcgcgagcgtcgtg
aagggcgatctcgtgcgcctcgaggaaattccgctgctcctgcacgtgccgggcctcggc
gtgcatgcacgcggcacgcgcgtgctgctcgacgtgatgtcgctcgacgagctgacgatc
gaggcgtcggtgcggctgctaaacgtgctcgacgcgccgaccgtgacgagcggcgatgcg
gcggatgaagaggaagagaccgaaggcggcgacgatacgctggtcgatgcgcaagacgcg
tcggcggaatccgaggccgaagcgctggccgagtcggacggcgtgacggccgaaggcggc
gaggccgcgaacgccaacagccaggcaagcgaagaggggcgcgcatcatga
DBGET
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