Burkholderia cepacia GG4: GEM_3147
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Entry
GEM_3147 CDS
T02205
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bct
Burkholderia cepacia GG4
Pathway
bct03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bct00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GEM_3147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bct03021
]
GEM_3147
03400 DNA repair and recombination proteins [BR:
bct03400
]
GEM_3147
Enzymes [BR:
bct01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GEM_3147
Transcription machinery [BR:
bct03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GEM_3147
DNA repair and recombination proteins [BR:
bct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GEM_3147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AFQ49542
UniProt:
A0A9W3K222
LinkDB
All DBs
Position
1:complement(3430052..3431029)
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AA seq
325 aa
AA seq
DB search
MQTSLLKPKIIAVESLGENHARVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VVHEYSTLDGVQEDVVNLLLNLKGVVFKLHNRDEVTVTLRKEGEGVVTAGDIELAHDCEV
INPNHVIAHLSKGGKLDVQIKIEKGRGYVPGNVRRYGEDTAKIIGRIVLDASFSPVRRVS
YAVESARVEQRTDLDKLVMNIETSGVITPEEAIRQSARILVDQLSVFAALEGTETAAEAP
SRAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLDK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccagtttgctgaaacccaagatcatcgccgtggaatcgctgggcgagaaccac
gcgagggtggtcatggaaccgttcgaacgcggttacggccataccttgggcaatgcgctt
cgccgcgtgctgttgtcgtcgatggtaggctatgcgccgaccgaagtcacgatcgcaggc
gtggtgcacgagtactcgacgcttgatggcgtgcaagaggacgtcgtcaacctgctgctg
aacctgaagggtgtggtgttcaagctgcacaaccgtgacgaagtgacggtgaccctgcgc
aaggaaggcgaaggcgtcgtcacggccggcgatatcgagctggctcacgattgcgaagtc
atcaacccgaatcacgtgatcgcacacctgtcgaagggcggcaagctcgacgttcagatc
aagatcgaaaagggtcgcggctatgtgcccggcaacgtccgtcgctacggcgaagacacg
gccaagatcatcggccgcatcgtcctcgatgcatcgttctcgccggttcgccgcgtgagc
tacgccgttgaaagcgcacgtgtcgagcagcgtaccgacctcgacaagctcgtgatgaac
atcgaaacgagcggcgtgatcaccccggaagaggcgatccgtcaatcggcccgcatcctg
gtcgaccagctgtccgtgttcgcggcactggaaggcacggaaacggctgccgaggcaccg
tcgcgcgcaccgcagatcgatccgatcctgctgcgtccggtggacgatctcgaactgacg
gttcgttcggcgaactgcctgaaggccgagaacatctactacatcggcgacctgatccag
cgcacggaaaacgagctgctgaagacgccgaacctcggtcgcaagtcgctcaacgagatc
aaggaagtgctcgcttcgcgcggtctcacgctgggcatgaagctcgagaactggccgccg
gctggtctcgacaagtaa
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