Burkholderia cepacia GG4: GEM_4243
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Entry
GEM_4243 CDS
T02205
Name
(GenBank) helicase c2
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
bct
Burkholderia cepacia GG4
Pathway
bct03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bct00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GEM_4243
09124 Replication and repair
03420 Nucleotide excision repair
GEM_4243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bct03021
]
GEM_4243
03036 Chromosome and associated proteins [BR:
bct03036
]
GEM_4243
03400 DNA repair and recombination proteins [BR:
bct03400
]
GEM_4243
Enzymes [BR:
bct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
GEM_4243
Transcription machinery [BR:
bct03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GEM_4243
Chromosome and associated proteins [BR:
bct03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
GEM_4243
DNA repair and recombination proteins [BR:
bct03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GEM_4243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
GlgS
ResIII
Motif
Other DBs
NCBI-ProteinID:
AFQ50633
UniProt:
A0A9W3K4H9
LinkDB
All DBs
Position
2:complement(1172248..1174548)
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AA seq
766 aa
AA seq
DB search
MSYVVAVRAMCEFTARRGDLDLRFTPAPTALEGIAGHGAVTSNRGARYETEIALTGTWGT
LTVRGRADGYDPVANRLEEIKTYRGSLDAMPANHRALHWAQAKIYAHLMCDARALTEIDV
ALVYFDIVSERETVLTETLGASALAAFFAEQCACFVGWAERETAHRTARDAALRALTFPH
GQFRSGQRELAVSVYRAARDERCLMAQAPTGIGKTLGTVFPLLKACGEGELDHVFFLTAK
TPGRALALEAATTLGAGTPALPLRVLELVARDKACEHPDSACHGESCPLAQGFYDRLPAA
RDAAIGAGLLDRETVRTAALAHDVCPYYLAQELARWSDMVIGDYNYYYDGSAMLHTLAQQ
NQWRVGVLVDEAHNLLDRARKMYSASLDPFAFAAAREAAPAALRKAFDRLARAWGTVNRA
QAERYAAYPEIPGPIVSAVQNLVAAIGEHLTDAPRANGDALLRFHFEAIQFGVLADAFDS
ASIFDATLHGEPLPRQSGLDGVAPAGRRRRIQSTLCVRNVIPAGFLAPRYEAARATVLFS
GTLSPFHFYRDTLGLPGDTGWLDVDGPFRAEQLTVRVASHVSTRWRDRDRSLEPIADLIA
AQYATRPGNYLGFLSSFDYLGRVVALMQTRHPDVPVWAQAPGMAESERDAFLARFDAGGR
GVGFAVLGGAFSEGVDLVGERLIGAFIATLGLPQVNDVNEQMRRAMDVRFGNGYDYMYLY
PGLQKVVQAAGRVIRTEHDEGVVHLIDDRYRRREVRDLLPRWWRIG
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgtcgtcgcggtgcgggcgatgtgcgagttcaccgcgcgacgcggcgatctc
gacctgcgtttcacgcccgcgccgaccgcgctcgaaggcatcgcgggccacggcgccgtt
acctcgaatcgcggcgcgcgctacgagaccgagatcgcgctgaccggcacgtggggcacg
ctcaccgtgcgcgggcgcgccgacggctacgatccggtcgcgaaccggctcgaggaaatc
aagacctatcgcggcagcctcgacgcgatgccggccaatcaccgcgcgctgcactgggcg
caggcgaagatctatgcacatctgatgtgcgacgcgcgcgccctcacggaaatcgacgtc
gcgctcgtgtacttcgacatcgtgtccgagcgcgagaccgtgctgacggaaacgctgggc
gcgagcgcgctcgccgcattcttcgccgaacagtgcgcatgcttcgtcggctgggccgag
cgcgagaccgcacatcgcacggcccgcgacgccgcgctgcgtgcgctgacgtttccgcac
gggcagttccgcagcgggcagcgcgagctggcggtttccgtgtatcgggcggcgcgcgac
gagcgctgcctgatggcgcaggcgccgaccggcatcggcaagacgctcggcacggtcttc
ccgctgctgaaggcgtgcggcgagggcgagctcgatcatgtgttcttcctgaccgcgaag
acgcccggacgcgcgctcgcgctcgaagcggccaccacgctcggcgccggcacgccggcg
ctgccgctgcgcgtgctggagctcgtcgcgcgcgacaaggcgtgcgagcatccggacagc
gcgtgtcacggcgaatcgtgcccgctcgcgcaaggcttctacgaccggctgccggccgcg
cgcgacgcggcgatcggcgccgggctgctcgatcgggagaccgtccgtacggccgcgctc
gcgcacgacgtctgcccgtactacctcgcacaggaactcgcgcgctggtccgacatggtg
atcggcgactacaactactactacgacggcagcgcgatgctgcacacgctcgcgcagcag
aatcagtggcgcgtcggcgtgctcgtcgacgaggcgcacaacctgctcgatcgcgcgcgc
aagatgtacagcgcatcgctcgacccgttcgcattcgccgccgcgcgcgaggccgcgccg
gcggcgttgcgcaaggcgttcgaccggctcgcgcgcgcgtggggcacggtcaatcgagcg
caggccgagcgctacgcggcctacccggagattccgggcccgatcgtgtcggccgtgcag
aacctggtcgcggcgatcggcgaacacctgaccgatgcaccgcgcgcgaacggcgacgcg
ctgctgcgctttcatttcgaggcgatccagttcggcgtgctcgccgacgcattcgacagc
gcgtcgatcttcgatgcgacgctgcacggcgagccgctgccgcgccagtcggggctcgac
ggcgtcgcgccggccggccgccggcgccgtatccagtcgacgctgtgcgtgcgcaacgtg
attccagccggctttctcgcgccgcgctacgaagccgcgcgcgcgaccgtgctgttttcc
ggcacgctgagcccgttccatttctatcgcgacacgctggggctgccaggcgatacgggc
tggctcgacgtcgacgggccgttccgtgccgagcagctgaccgtgcgcgtcgcgagccac
gtatcgacgcgctggcgcgaccgcgatcgctcgctcgaaccgatcgcggacctgatcgcc
gcgcagtacgcgacgcgacccggcaactacctcggttttctcagcagcttcgattatctc
ggacgcgtcgtcgcgctgatgcagacgcgccatccggacgtgccggtgtgggcacaggcc
cccggcatggccgaaagcgagcgcgatgcctttctcgcacgcttcgacgcgggcgggcgc
ggtgtcggcttcgcggtgctgggtggtgcgttctcggagggcgtggacctggtcggcgag
cggctgatcggcgcgttcatcgcgacgctcgggctgccgcaggtcaacgacgtcaacgag
cagatgcggcgcgcgatggacgtgcgcttcggcaacgggtacgactacatgtatctgtat
ccgggcttgcagaaggtcgtgcaggcggccgggcgggtgattcgcaccgaacacgacgag
ggcgtcgtgcatctgatcgacgatcgttaccggcggcgggaagtgcgcgatctgctgccg
aggtggtggcggatcgggtga
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integrated database retrieval system