KEGG   Burkholderia cepacia GG4: GEM_4243
Entry
GEM_4243          CDS       T02205                                 
Name
(GenBank) helicase c2
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
bct  Burkholderia cepacia GG4
Pathway
bct03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bct00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    GEM_4243
  09124 Replication and repair
   03420 Nucleotide excision repair
    GEM_4243
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bct03021]
    GEM_4243
   03036 Chromosome and associated proteins [BR:bct03036]
    GEM_4243
   03400 DNA repair and recombination proteins [BR:bct03400]
    GEM_4243
Enzymes [BR:bct01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     GEM_4243
Transcription machinery [BR:bct03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     GEM_4243
Chromosome and associated proteins [BR:bct03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    GEM_4243
DNA repair and recombination proteins [BR:bct03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     GEM_4243
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 DEAD HBB GlgS ResIII
Other DBs
NCBI-ProteinID: AFQ50633
UniProt: A0A9W3K4H9
LinkDB
Position
2:complement(1172248..1174548)
AA seq 766 aa
MSYVVAVRAMCEFTARRGDLDLRFTPAPTALEGIAGHGAVTSNRGARYETEIALTGTWGT
LTVRGRADGYDPVANRLEEIKTYRGSLDAMPANHRALHWAQAKIYAHLMCDARALTEIDV
ALVYFDIVSERETVLTETLGASALAAFFAEQCACFVGWAERETAHRTARDAALRALTFPH
GQFRSGQRELAVSVYRAARDERCLMAQAPTGIGKTLGTVFPLLKACGEGELDHVFFLTAK
TPGRALALEAATTLGAGTPALPLRVLELVARDKACEHPDSACHGESCPLAQGFYDRLPAA
RDAAIGAGLLDRETVRTAALAHDVCPYYLAQELARWSDMVIGDYNYYYDGSAMLHTLAQQ
NQWRVGVLVDEAHNLLDRARKMYSASLDPFAFAAAREAAPAALRKAFDRLARAWGTVNRA
QAERYAAYPEIPGPIVSAVQNLVAAIGEHLTDAPRANGDALLRFHFEAIQFGVLADAFDS
ASIFDATLHGEPLPRQSGLDGVAPAGRRRRIQSTLCVRNVIPAGFLAPRYEAARATVLFS
GTLSPFHFYRDTLGLPGDTGWLDVDGPFRAEQLTVRVASHVSTRWRDRDRSLEPIADLIA
AQYATRPGNYLGFLSSFDYLGRVVALMQTRHPDVPVWAQAPGMAESERDAFLARFDAGGR
GVGFAVLGGAFSEGVDLVGERLIGAFIATLGLPQVNDVNEQMRRAMDVRFGNGYDYMYLY
PGLQKVVQAAGRVIRTEHDEGVVHLIDDRYRRREVRDLLPRWWRIG
NT seq 2301 nt   +upstreamnt  +downstreamnt
atgagctatgtcgtcgcggtgcgggcgatgtgcgagttcaccgcgcgacgcggcgatctc
gacctgcgtttcacgcccgcgccgaccgcgctcgaaggcatcgcgggccacggcgccgtt
acctcgaatcgcggcgcgcgctacgagaccgagatcgcgctgaccggcacgtggggcacg
ctcaccgtgcgcgggcgcgccgacggctacgatccggtcgcgaaccggctcgaggaaatc
aagacctatcgcggcagcctcgacgcgatgccggccaatcaccgcgcgctgcactgggcg
caggcgaagatctatgcacatctgatgtgcgacgcgcgcgccctcacggaaatcgacgtc
gcgctcgtgtacttcgacatcgtgtccgagcgcgagaccgtgctgacggaaacgctgggc
gcgagcgcgctcgccgcattcttcgccgaacagtgcgcatgcttcgtcggctgggccgag
cgcgagaccgcacatcgcacggcccgcgacgccgcgctgcgtgcgctgacgtttccgcac
gggcagttccgcagcgggcagcgcgagctggcggtttccgtgtatcgggcggcgcgcgac
gagcgctgcctgatggcgcaggcgccgaccggcatcggcaagacgctcggcacggtcttc
ccgctgctgaaggcgtgcggcgagggcgagctcgatcatgtgttcttcctgaccgcgaag
acgcccggacgcgcgctcgcgctcgaagcggccaccacgctcggcgccggcacgccggcg
ctgccgctgcgcgtgctggagctcgtcgcgcgcgacaaggcgtgcgagcatccggacagc
gcgtgtcacggcgaatcgtgcccgctcgcgcaaggcttctacgaccggctgccggccgcg
cgcgacgcggcgatcggcgccgggctgctcgatcgggagaccgtccgtacggccgcgctc
gcgcacgacgtctgcccgtactacctcgcacaggaactcgcgcgctggtccgacatggtg
atcggcgactacaactactactacgacggcagcgcgatgctgcacacgctcgcgcagcag
aatcagtggcgcgtcggcgtgctcgtcgacgaggcgcacaacctgctcgatcgcgcgcgc
aagatgtacagcgcatcgctcgacccgttcgcattcgccgccgcgcgcgaggccgcgccg
gcggcgttgcgcaaggcgttcgaccggctcgcgcgcgcgtggggcacggtcaatcgagcg
caggccgagcgctacgcggcctacccggagattccgggcccgatcgtgtcggccgtgcag
aacctggtcgcggcgatcggcgaacacctgaccgatgcaccgcgcgcgaacggcgacgcg
ctgctgcgctttcatttcgaggcgatccagttcggcgtgctcgccgacgcattcgacagc
gcgtcgatcttcgatgcgacgctgcacggcgagccgctgccgcgccagtcggggctcgac
ggcgtcgcgccggccggccgccggcgccgtatccagtcgacgctgtgcgtgcgcaacgtg
attccagccggctttctcgcgccgcgctacgaagccgcgcgcgcgaccgtgctgttttcc
ggcacgctgagcccgttccatttctatcgcgacacgctggggctgccaggcgatacgggc
tggctcgacgtcgacgggccgttccgtgccgagcagctgaccgtgcgcgtcgcgagccac
gtatcgacgcgctggcgcgaccgcgatcgctcgctcgaaccgatcgcggacctgatcgcc
gcgcagtacgcgacgcgacccggcaactacctcggttttctcagcagcttcgattatctc
ggacgcgtcgtcgcgctgatgcagacgcgccatccggacgtgccggtgtgggcacaggcc
cccggcatggccgaaagcgagcgcgatgcctttctcgcacgcttcgacgcgggcgggcgc
ggtgtcggcttcgcggtgctgggtggtgcgttctcggagggcgtggacctggtcggcgag
cggctgatcggcgcgttcatcgcgacgctcgggctgccgcaggtcaacgacgtcaacgag
cagatgcggcgcgcgatggacgtgcgcttcggcaacgggtacgactacatgtatctgtat
ccgggcttgcagaaggtcgtgcaggcggccgggcgggtgattcgcaccgaacacgacgag
ggcgtcgtgcatctgatcgacgatcgttaccggcggcgggaagtgcgcgatctgctgccg
aggtggtggcggatcgggtga

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