Burkholderia cepacia GG4: GEM_4878
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Entry
GEM_4878 CDS
T02205
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bct
Burkholderia cepacia GG4
Pathway
bct03030
DNA replication
bct03410
Base excision repair
bct03420
Nucleotide excision repair
bct03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GEM_4878
03410 Base excision repair
GEM_4878
03420 Nucleotide excision repair
GEM_4878
03440 Homologous recombination
GEM_4878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bct03032
]
GEM_4878
03400 DNA repair and recombination proteins [BR:
bct03400
]
GEM_4878
Enzymes [BR:
bct01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GEM_4878
DNA replication proteins [BR:
bct03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GEM_4878
DNA repair and recombination proteins [BR:
bct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GEM_4878
NER (nucleotide excision repair)
GGR (global genome repair) factors
GEM_4878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Spo0A_C
Motif
Other DBs
NCBI-ProteinID:
AFQ51265
UniProt:
A0A9W3PC71
LinkDB
All DBs
Position
2:complement(1900479..1903232)
Genome browser
AA seq
917 aa
AA seq
DB search
MPEERNLEGKTLLLVDGSSYLYRAYHAMPDLRGPGGEPTGALYGIINMLRRMRKEVSAEY
SACVFDAKGKTFRDDLYADYKANRPSMPPDLALQVEPIHGAVRALGWPLLMVEGVEADDV
IGTLAREAERHGMNVIVSTGDKDLAQLVSDHVTLVNTMTNETLDRDGVIAKFGVPPERII
DYLALIGDTVDNVPGVEKCGPKTAVKWLSQYDSLDGVIEHAGEIKGVVGDNLRRALDFLP
LGRTLVTVETACDLAPHLESIEASLKTDGEARDLMRDIFARYGFKTWLREVDSAPAEGGG
ADVPEGEPAQVVAADIVREYEAIQTWAQFDAWFAKIDAAALTAFDTETTSLDPMVARLVG
LSFSVEPGKAAYLPVAHRGPDLPEQLPLDDVLARLKPWLEAADRKKVGQHLKYDAQVLAN
YDIALNGIEHDTLLESYVLESHRTHDMDSLALRHLGVKTIKYEDVAGKGAKQIGFDQVAL
EQAAEYAAEDADITLQLHQALYPQVAREAGLERVYRDIEMPVSLVLRKMERTGVLIDDAR
LQAQSSEIAARLIELEGQAYELAGGEFNLGSPKQIGQIFFEKLQLPVVKKTPSGAPSTDE
EVLQKLAEDYPLPKLLLEHRGLSKLKSTYTDKLPRMVNPATGRVHTNYAQAVAVTGRLAS
NDPNLQNIPVRTAEGRRIREAFIASPGHRIVSADYSQIELRIMAHISGDASLLRAFSQGE
DIHRATAAEVFGVTPLEVNSDQRRIAKVINFGLIYGMSAFGLASNLGITRDAAKLYIDRY
FARYPGVAQYMEDTRAVAKEKGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGT
AADLIKLSMIAVDDWLTRDRLASKMIMQVHDELVLEVPDSELSLVREKLPEMMCGVAKLK
VPLVAEVGAGANWEEAH
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaacgaaatctggaaggtaagaccctgctattggttgacggttcgagctat
ctgtatcgggcttaccatgcgatgcctgatttgcgtggcccgggcggggagccgaccgga
gcgctctacggaatcatcaacatgctgcgccgtatgcgcaaggaagtcagtgcagagtat
agcgcttgcgtgttcgatgcaaagggtaagacgttccgtgacgacctttatgccgactat
aaggcaaaccgtccgtcgatgccgcccgatctcgcattgcaggtcgaaccgatccacggc
gccgtgcgtgcgctcggctggccgctgctgatggtcgagggcgtcgaagccgacgacgtg
atcggcacgctcgcgcgcgaagccgaacggcacgggatgaacgtgatcgtgtcgaccggc
gacaaggatctcgcgcagctcgtctccgatcacgtcacgctcgtcaacacgatgaccaac
gagacgctcgatcgcgacggcgtgatcgcgaagttcggcgtgccgcccgagcggatcatc
gattacctcgcgttgatcggcgacaccgtcgacaacgtgccgggcgtcgagaagtgcggg
ccgaagacggccgtgaaatggctgtcgcaatacgacagcctcgacggcgtgatcgaacac
gcgggcgagatcaagggtgtggtcggcgacaacctgcgccgcgcgctcgacttcctgccg
ctcggccgcacgctcgtgaccgtcgagacggcttgcgatctcgcaccgcatctcgagtcg
atcgaagcgtcgctgaagaccgacggcgaagcacgcgacctgatgcgcgacatctttgcg
cgctacggcttcaagacgtggctgcgcgaagtcgacagcgcgcccgcagagggcggcggc
gccgacgtgccggaaggcgagcccgcacaagtggtggcagcggacatcgtccgcgaatac
gaagcgatccagacctgggcgcagttcgatgcgtggttcgcgaagatcgatgcggccgcg
ctgaccgcgttcgacaccgaaaccacctcgctcgatccgatggtcgcacggctcgtcggc
ctgtcgttctcggtcgagccgggcaaggccgcgtatcttccggtcgcgcaccgcggcccg
gacctgcccgagcagcttccgctcgacgacgtgctcgcgcgcctgaagccgtggctcgaa
gcggccgatcgcaagaaggtcggccagcacctgaagtacgacgcgcaggtgctcgcgaac
tacgacatcgcactgaacggcatcgagcacgacacgctgctcgagtcgtacgtgctcgaa
tcgcaccgcacgcacgacatggacagcctcgcgctgcgtcatctgggcgtcaagacgatc
aagtatgaagacgtggccggcaagggcgcgaagcagatcggcttcgaccaggtagcgctc
gagcaggccgccgagtatgcggccgaagatgcggacatcacgctgcagcttcatcaagcg
ctgtatccgcaggtcgcacgcgaagcgggcctcgagcgcgtgtatcgcgacatcgagatg
ccggtatcgctcgtgctgcgcaagatggagcgcaccggcgtgctgatcgacgacgcacgc
ctgcaggcgcaaagcagcgagatcgcggcgcggctcatcgagctcgaagggcaggcgtac
gaactggccggcggcgagttcaatctcggctcgccgaagcagatcggccagatcttcttc
gagaagctgcaactgccggtcgtgaagaaaacgccgagcggtgcgccgtcgaccgacgaa
gaagtgttgcagaagcttgccgaggattacccgctgccgaagctgctgctcgagcatcgc
gggctgtcgaagctgaagtcgacctacaccgacaagctgccgcgcatggtgaatcccgcc
acgggccgcgtgcatacgaactatgcgcaggctgtcgcggtcacgggccgcctcgcgtcg
aacgatcccaatcttcagaacattccggtgcgcacggccgaaggccggcggatccgcgaa
gcgttcatcgcatcgccgggccaccggatcgtgtcggccgattattcgcagatcgaactg
cggatcatggcgcacatttccggcgacgcgtcgctgctgcgcgcgttctcgcagggtgaa
gacattcaccgcgcaaccgccgccgaagtgttcggcgtgacgccgctggaggtcaattcc
gaccagcgccggatcgcgaaggtgatcaacttcgggctcatctacgggatgagcgcgttc
ggcctcgcgtcgaacctcggcatcacgcgcgatgcggcgaagctctacatcgaccgctat
ttcgcgcgctacccgggcgtcgcgcagtacatggaagacacgcgcgccgtggcgaaggag
aagggctacgttgaaaccgttttcggtcgccgtctgtggctgccggagatcaacggcggc
aacggtccgcgccgccaggcggccgaacgcgcggccatcaatgcgccgatgcagggcacg
gcggccgacctgatcaagctgtcgatgatcgcggtcgacgactggctcacgcgcgaccgg
ctggcgtcgaagatgatcatgcaggtacacgatgaactggtgctcgaggtgcccgacagc
gaactgtcgctcgtgcgcgagaagctgccggaaatgatgtgcggcgtcgccaagctgaag
gtgccgctggtcgcggaagtgggcgccggcgcgaactgggaagaggcacactga
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