Burkholderia cepacia GG4: GEM_5182
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Entry
GEM_5182 CDS
T02205
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
bct
Burkholderia cepacia GG4
Pathway
bct02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bct00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GEM_5182
Enzymes [BR:
bct01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
GEM_5182
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_4
PAS
PAS_9
Motif
Other DBs
NCBI-ProteinID:
AFQ51568
UniProt:
A0A9W3K6F5
LinkDB
All DBs
Position
2:complement(2227231..2229234)
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AA seq
667 aa
AA seq
DB search
MDDENDSAVLEAHLGTRSPCWSLGTDSNALELAAVRGLTNVAIALTTGQAAQIRALTGVT
SHLVLELALFGDRVSLHLVGRKVDTTLWAGTASAYSDTASVAGDLAHGLAFAEQVVSEVN
SLVVILDRNGRVQRFNRLCEEVTGKREVDVIGRSAFELFMSPEQGAQSRSNISGFFASNS
SYAVERYINTVNGPRLFQFRNKFVQSGSGADEQFLICSGIDITEERNAQRRLTELANSDV
LTGLPNRHAISERIHVALTADRTDMRGQVGILFLDLDNFKRVNDHYGHITGDRLLQDVSA
VISGCLPSGATLARLGGDEFLVLFEHGTRPLLEATAQIILERLRTPIHLGLVEVYTSCSI
GIAMYPQHGDSLETLIRSADTAMYVAKEEGKHTYRVFSLEMNQKVAKYMWLDTNLRKALE
EEQFVLHYQPVVDIATGDVHGVEALIRWQSPDRGLVAPIEFIRFAEESGLIAPLGRWVMR
TAAAQAAAWKAKGLDVRIAVNVSARQLQDMNIVDQFASILDGAGQKSSLVDIELTESSFI
EDEEAAHELMNQFRQLGAEIHLDDFGTGYSSLSQLSRLPLDSIKLDRSFITGIDRNPRSQ
ALVRSVVSLAKALSFSVIAEGVETHAEAEFLKQINVDHAQGFYFARPMPAQAFEAWLAET
RKLRLIA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaaaacgatagcgcggtgcttgaggcgcatctcggtacgcgcagcccatgc
tggagcctcggcaccgacagcaatgcactcgaactggccgccgtgcgcggcctgaccaat
gtcgcgattgcgctgacgaccgggcaggccgcgcagattcgcgcgctgaccggcgtcacg
tcgcacctcgtgcttgaactcgcgctgttcggcgatcgggtcagcctgcatctggtcggc
aggaaggtcgacacgaccctgtgggccggcacggcctctgcctattccgataccgcgtcc
gtcgcgggcgatctcgcgcacgggctcgcgttcgccgagcaggtcgtgtccgaagtgaat
tcgctcgtcgtgatcctcgaccgcaacgggagggtgcagcgcttcaaccgtctgtgcgag
gaggtgacgggcaagcgcgaggtcgacgtgatcggccgtagcgcgttcgaactgttcatg
agccccgagcagggtgcgcagtcgcgcagcaacatcagcggttttttcgcgagcaacagc
tcgtacgcggtcgagcgctacatcaacacggtcaacggcccgcgcctgttccagttccgc
aacaagttcgtgcagagcggcagcggtgccgacgagcagttcctgatctgttcgggcatc
gacatcaccgaggaacgcaacgcgcagcggcggctcaccgaactcgcgaattccgacgtg
ctgaccggcttgccgaaccgtcatgcaatcagcgagcgcatccatgtcgcgctgacagcc
gaccgcaccgacatgcgcggccaggtcggcatcctgttcctcgatctcgacaacttcaag
cgcgtcaacgaccactacggacacatcaccggcgaccgcctgctgcaggacgtgtccgcg
gtcatcagcggctgcctgccgtcaggcgcgacgctcgcgcggctcggcggcgacgaattc
ctcgtgctgttcgagcacggcacgcggccgctgctcgaggcgaccgcgcagatcatcctc
gagcgactgcgtacgccgatccatctcgggctggtggaggtctacacgagctgctcgatc
ggcatcgcgatgtatccgcagcacggcgattcgctcgaaacgctgatccgcagcgccgac
accgcgatgtacgtcgcgaaggaagagggcaagcacacgtaccgcgtgttctcgctggag
atgaaccagaaggtcgcgaagtacatgtggctcgacacgaacctgcgcaaggcgctcgag
gaagagcagttcgtgttgcattaccagccggtcgtcgacatcgccaccggcgacgtgcac
ggcgtcgaggcgctgattcgctggcagtcgcccgatcgcgggctcgtcgcgccgatcgag
ttcatccgcttcgcggaggagtcggggttgatcgcgccgctcggccgctgggtgatgcgc
accgcggccgcgcaggccgccgcgtggaaggcgaaggggctcgacgttcggatcgcggtg
aacgtatccgcgcggcagttgcaggacatgaacatcgtcgatcagttcgcgtcgattctc
gacggcgcggggcagaagtcgagcctggtcgacatcgaactcaccgaaagcagcttcatc
gaggatgaagaagcggcgcacgagctgatgaatcagttccgccagctgggcgcggagatt
cacctcgacgatttcggcaccggctattcgtcgctgtcgcaactgtcgcgcctgccgctc
gattcgatcaagctcgatcgcagctttatcacgggcatcgaccgcaacccgcgctcgcag
gcgctggtgcgctcggtcgtgtcgctcgcgaaggcgctgagtttctcggtgatcgccgaa
ggcgtcgaaacgcacgcggaagccgagttcctgaagcagatcaatgtcgaccacgcgcag
ggcttctactttgcgcggccgatgccggcccaggccttcgaggcctggctcgcggaaacg
agaaagctcaggctgatcgcctga
DBGET
integrated database retrieval system
