Burkholderia cepacia GG4: GEM_5688
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Entry
GEM_5688 CDS
T02205
Name
(GenBank) hemagluttinin/autotransporter adhesin
KO
K21449
trimeric autotransporter adhesin
Organism
bct
Burkholderia cepacia GG4
Brite
KEGG Orthology (KO) [BR:
bct00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bct02000
]
GEM_5688
Transporters [BR:
bct02000
]
Other transporters
Pores ion channels [TC:
1
]
GEM_5688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_stalk
YadA_anchor
YadA_head
DUF7070
SlyX
Coleoptericin
Motif
Other DBs
NCBI-ProteinID:
AFQ52072
UniProt:
A0A9W3KAW8
LinkDB
All DBs
Position
2:2757868..2762760
Genome browser
AA seq
1630 aa
AA seq
DB search
MEKKQISMLVAAMFAGVGIMSAGLVHAQSNFVDRGNPDNALNGQCIDGTNPLCVATKSGQ
YVAVSTASYTAGNNAKAGAAGIAIGDRANANSKDTSSGGGGATAIGVGAQALANSATAIG
TVALAQGNTALAIGRQSAAVGDYSMALGNVADAHGKSSIALGHSALAQGDRSVAIGGANP
TASDGVSNGAAYDAATQTRAAGTQSVAIGAGAQTNGDNQIAIGSGSVGAANNTNQPVFGG
TAAPVGGAVSFGSIGNERQLKNVAAGVDGTDAVNIAQLKSVNDGLTASIGNVDSRVTNLS
TTVGGQITTINTSLSTATTNITNLQAADLLNVKYTDSTHTAISLDGNGGTTIGNVKAGVA
DTDAVNVGQLNSGLSTVQGNVNTQITNLGSSLSTSIVDATKDAVQYDGGAHDSVTLGGVN
ATSPVGLHNVATGTADTDAVNVKQLNSGISTAVAPINQNITNLQTSLSTTNQTIDNLNTS
VTNIGTSLSTATSNITQLQQADARNVKYDGQSGFDTVTLQGTNGTKIKNVADGKDVHDAV
NVGQLDGGLSSLSTSVTNNVNSQISNLSTTINSQIGAATKNAVQYDDDAHTSVTLGGQGA
SGPVSLHNVADGVANNDAVNVGQLNGAISPIRSSLSSAVTNITNLQGNVTSLSTSLGATN
QNVTNLSSSLAGTQTDVSSLQAADKRNVKYDGAEGFDSVTLAGPNGTKVTNVKAAELSTT
STDAVNGSQLYATNQTVAKQGDSITQIGGQVTQNTTSIGALQQDALQWSAAAGAYDASHG
SGSAQKITNVAAGDVSATSTDAINGAQLQRVQDQIGTQIGGATKNAVVYDTDTNGNRLNS
VTLAGGAAGAVKIANVAPGSLDANSTDAVNGSQLYATNQNVATQTTRVDNLTTNVSTLTS
NLATTNTNVTNLQQADKLNVKYDGSDKNTVTLGGAGHVPVKLSNVADGVANNDAVNVGQL
SKVTGNLQQQITTQGGTITSIDQRVTTNTTSISALKQDALQWNATLGAYDASHGSSAPQQ
IANLAQGVKGTDAVNVDQLNSAVKEGVGALDSLAVKYDDASKRQVSLGAGNDGVPVRVTN
VAEGGVYAGSSDAVNGSQLRYATDSVAAALGGGASANPNGSINAPKYDVGGDTFNNVGDA
LGNIDHRVAINATTIQNHETRIGNAETNIVNNTKAIAGLQQDALQFDPVVGAYNAARGGA
ATKISSVADGNVAAGSTDAVNGGQLFGVKSDLEQQITNVSNQAGEAVKNVVKYDVDASGN
RLNSVSLVGGDVTSPVVLKNVAAGVADTDAVNVKQLKGVQSNIDVLGALAVTYDDSSKHV
ITLGGGAGGTKITNVQAGTLSATSTDAVNGSQLHATNQQVAQNTTDISNLQQNVTNVANG
KAGLVQQQDPNGQITVGAGTGGTSVNFANGANADRVLTGVAAGVNSNDAVNLGQLDSALQ
GVRADQQVKGVATDANTNWIARADAGSFGSTATATGNNSVAVGQGSVADRDNTFSVGATG
NERQITHVAAGTAPTDAVNVQQLNDNVAAASAASRGYTDQRVGQVYNDLNTVKKDMFGGV
ASAMAVAGLPQPTAPGRSMVTAATANYRGQQGFAAGYSYVTQNEKWVVKASVTGNTRSDF
GAVVGAGYQF
NT seq
4893 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaagcagatttcgatgctcgtggcggcgatgttcgccggagtaggcatcatg
agtgcagggctcgttcatgcgcagagcaacttcgtcgaccgcggcaatccggacaacgcg
ctcaatgggcagtgtatcgacggaacgaacccgctttgcgttgcgaccaagagtggccag
tatgtcgctgtgagcaccgcgagctataccgcgggcaacaacgcgaaggcaggcgccgcc
ggcatcgcgatcggcgatcgggccaacgcgaacagcaaggacaccagcagcggcggtggc
ggtgccaccgcaattggcgtcggtgcacaggcgcttgccaattcggcgacggcgatcggc
acggtcgctctcgcgcaaggcaacacggcactcgcgatcggacgtcaatcggccgcagtc
ggcgattactcgatggcgctcggcaacgtcgcggatgcgcacgggaagagctcgatcgca
ctcggccattcggcgcttgcgcaaggcgatcgctcggtcgcgatcggcggcgcaaatccg
acggcgagcgacggcgtgtcgaacggtgcagcctatgacgccgccacgcagacgcgtgcg
gcaggcacgcaatccgtcgcgatcggcgcaggtgctcagaccaacggcgacaaccagatc
gcgatcggctcgggcagcgtcggtgcggcgaacaacacgaaccagccggtgttcggcggc
acggccgcaccggtcggcggcgcggtttcgttcggttcgatcggcaacgagcgtcagctg
aagaacgtcgcggccggcgtggatggcacggatgccgtcaacattgcgcagctgaagtcg
gtcaacgacggcctgacggcgagcatcggaaacgtcgattcgcgcgtgacgaacctgagc
acgacggtcggcggccagatcacgaccatcaacacgtcgctgtcgacggcaacgaccaat
atcaccaatctgcaagcggccgacctgctgaacgtgaaatacaccgacagcacgcacacc
gcaatctcgctcgacggcaacggcggcacgacgatcggcaacgtgaaggcgggtgtcgcc
gacacggacgcggtgaacgtcggccagctgaacagcggcctgtcgacggtgcaaggcaat
gtcaatacgcagatcaccaacctcggctcgtcgctgagcacgtcgatcgtcgacgcgacg
aaggacgcggtccagtatgacggcggcgcgcacgacagcgtgacgctcgggggcgtgaac
gccacttcaccggtcggtctgcataacgtggcgacgggcaccgccgacacggacgcggtg
aacgtcaagcaactgaacagcggcatcagcaccgcggttgcaccgatcaaccagaacatc
acgaacctgcagacgtcgctcagcacgaccaatcagacgatcgacaatctgaacacgagc
gtcacgaacatcggcacgtcgctgagcacggccacgtcgaacatcacgcaactgcaacag
gcggatgcacgcaatgtgaagtacgacggccagtcgggcttcgatacggtgacgctgcag
ggcaccaacggcaccaagatcaagaatgtcgcggatggcaaggatgtgcacgatgcggtg
aatgtcggccagctcgacggcggcctgtcgtcgctcagcacgagcgtgacgaacaacgtc
aattcgcagatcagcaatctcagcacgacgatcaacagccagatcggtgcggccacgaag
aacgcggtgcagtacgacgacgacgctcacacgagcgtcacactcggcgggcaaggtgcg
agcggcccggtgagcctgcacaacgtcgcggatggggtcgcgaacaacgatgccgtcaac
gtcggtcaattgaacggcgcgatttctccgatccggtcgtcgctgtcgtcggccgtgacg
aacatcaccaacctgcaaggcaatgtgaccagcctgagcacgtcgctcggcgcgaccaac
cagaacgtcacgaacctgagctcgagccttgccggcacgcagacggacgtgtcgagcctg
caggcggccgacaagcgaaacgtgaaatacgacggtgcggaaggcttcgattccgtgacg
ctcgcgggcccgaacggcacgaaggtgacgaacgtcaaggcggccgagctgtcgacgacg
agcaccgatgcggtgaacggctcgcaactgtatgcgaccaaccagacggtggcgaagcag
ggcgactcgatcacgcagatcggtggccaggtcacgcagaacacgaccagcatcggcgcg
ctgcaacaggatgcgctgcaatggtcggcagcggccggcgcatacgatgcctcgcacggt
agcggttcggcgcagaagatcacgaacgttgcggccggcgatgtgtcggcgacgagcacg
gacgcaatcaacggcgcgcaactgcagcgcgtgcaggaccagatcggcacgcagatcggt
ggggcgacgaagaatgcggtcgtatacgacacggatacgaacggcaatcgtctgaattcg
gtgacgctcgcgggcggggctgccggcgcggtgaagatcgcgaacgtcgcgccgggttcg
ctcgacgcgaacagcaccgatgcggtcaacggctcgcagctgtacgcgaccaaccagaat
gtcgcgacgcagacgacgcgggtcgataacctgacgacgaacgtttcgacgctgacgagc
aacctggcgaccacgaatacgaacgtcacgaacctgcagcaggcggacaagctgaacgtc
aagtacgacggaagcgacaagaacaccgtcacactcggcggtgcgggccacgtcccggtc
aagctgtcgaacgtcgcggacggggtggcaaacaacgacgccgtcaacgtcggtcaactg
tcgaaggtcaccggcaatctgcagcagcagatcaccacgcaaggcggcacgatcacgtcg
atcgatcaacgcgtgacgacgaataccaccagcatttcggcgctaaagcaggacgcgctg
caatggaatgcgacgctcggcgcgtacgacgcaagccacggcagcagtgcgccgcagcag
atcgccaacctcgcgcaaggcgtgaagggcaccgacgcggtcaacgtcgatcagttgaat
agtgcggtgaaggaaggcgtcggcgcgctcgattcgctcgcggtgaagtacgacgatgcg
agcaagcggcaggtttcgctcggcgccggcaatgacggcgtgccggtgcgcgtgacgaac
gtcgcggaaggtggcgtctacgccggcagcagcgatgcggtgaacggctcgcaactgcgc
tacgctaccgacagcgtcgcggctgcactcggcggcggtgcctcggcgaacccgaacggt
tcgatcaatgcgccgaagtacgacgtcggcggcgacacgttcaataacgtcggtgacgcg
ctcggcaacatcgaccaccgcgtcgcgatcaacgcgacgacgatccagaaccacgaaacg
cgtatcggcaacgcggaaacgaatatcgtcaataacacgaaggccatcgcaggcttgcag
caagacgcgctgcaattcgatccggtcgtcggcgcctacaacgcagcgcgaggcggcgcg
gccacgaagatctccagcgtggcggacggcaatgtcgcggcgggcagcacggacgcggtg
aacggcggtcagttgttcggcgtgaaatcggatctcgaacagcagatcacgaacgtgtcg
aaccaggccggcgaggccgtgaagaacgtcgtgaaatacgatgtggacgcgagcggcaac
cgtttgaattccgtgtcgctcgtcggcggcgacgtcacgtcgcccgtcgtgttgaagaac
gtcgcggccggcgtggccgataccgacgcggtgaacgtgaagcaattgaagggcgtgcag
tcgaacatcgacgtgctcggtgcgctggccgtcacgtacgacgacagctcgaagcacgtc
atcacgctcggcggcggcgcgggcggcacgaagatcaccaacgtgcaggccggcacgctc
agcgcaaccagcacggacgcggtgaacggctcgcagctccacgcgacgaaccagcaagtc
gcgcagaacacgaccgacatctcgaacctgcagcagaacgtgaccaatgtcgcgaacggc
aaagccggcctcgtgcagcagcaggatccgaacgggcagatcacggtcggcgcgggtacc
ggcggcacgtcggtgaatttcgccaacggcgccaacgcggatcgcgtgctgacgggcgtg
gccgcgggcgtcaacagcaatgacgcggtgaacctcggtcagctcgacagcgcgctccag
ggcgtcagggccgaccagcaggtcaagggcgtcgccaccgatgcgaacacgaactggatc
gcccgcgcggatgcgggttcgttcggatcgaccgcgacggctaccggcaacaactcggtg
gccgtcgggcagggctcggttgcggatcgcgacaacacgttctccgtcggcgcgaccggc
aacgaacgtcagatcacccatgtcgcggccggtacggcgccgaccgatgcggtgaacgtg
cagcagctcaatgacaacgtcgcggcagcgtcggcggcatcgcgcggctacacggatcaa
cgtgtcggccaggtgtacaacgacctgaacaccgtcaagaaggacatgttcggcggcgtt
gcgtcggcgatggccgttgccggtcttccgcaaccgaccgcaccggggcgttcgatggtg
acggccgccacggcgaactaccgcggccagcaaggtttcgcggcgggttattcgtacgtg
acgcagaacgagaagtgggtcgtgaaagcgtccgtcacgggcaacacccgttcggacttc
ggcgcggtcgtcggcgcgggctaccagttctga
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integrated database retrieval system
