Beutenbergia cavernae: Bcav_0657
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Entry
Bcav_0657 CDS
T00893
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bcv
Beutenbergia cavernae
Brite
KEGG Orthology (KO) [BR:
bcv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcv03032
]
Bcav_0657
03400 DNA repair and recombination proteins [BR:
bcv03400
]
Bcav_0657
Enzymes [BR:
bcv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Bcav_0657
DNA replication proteins [BR:
bcv03032
]
Prokaryotic type
DNA Topoisomerases
Bcav_0657
DNA repair and recombination proteins [BR:
bcv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Bcav_0657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ACQ78919
UniProt:
C5BY25
LinkDB
All DBs
Position
732336..735077
Genome browser
AA seq
913 aa
AA seq
DB search
MPSSARKLVIVESPTKARTITPFLGDDYDVEASVGHIRDLPQPSELPAEMKKGPYRKFAV
DVENGFDPYYVVDADKKKKVSELRKKLKAADELYLATDEDREGEAIAWHLLEVLEPKVPV
KRMVFHEITREAIQRALEATRDLDTRLVDAQETRRILDRLYGYEVSPVLWRKIGPGLSAG
RVQSVATRLVVERERERMAFRSANYWDVRGEFSGGRGETAGTSFSARLTALDGDRVATGR
DFDDSGSLTSRAVHLDEAAATALVSALDGVDVVVRSVDTKPYTRRPAAPFTTSTLQQEAS
RKLRMNSRATMRTAQSLYENGYITYMRTDSVTLSTQAITAARRQAAELYGAEYVPDAPRL
YANKSKNAQEAHEAIRPAGDSFRTPAQVASRLSGDEFRLYELIWKRTVASQMADAKGSTA
SVKLGASAAYPDGATRDAEFSASGTVITFRGFLAAYEEGRDAGRYDEDGDGAGRGSSSGS
SAARETRLPDLAQGDQVAAESLTAEGHDTSPPPRYTEASLTAALEERGIGRPSTFAATIS
VIVDRGYVLRRGQALVPSWLAFSVVRLLEDHFGRLVDYDFTAAMESDLDRIARGEQDRVA
WLTRFYFGDEAAGSEGLQQLVSELGDIDARGINSIDLGGGVTVRVGRYGPYLEATGPDGE
PQRASVPDDVAPDELTLERARELLATQGEGDRELGTDPATGRTIVARSGRYGPYVTEVIP
DDAPAASDDAKPAKRKPAKPKPRTASLLQSMQLEAVDLEQALKLLSLPRVVGVDPESGDE
ITAQNGRYGPYLKKGTDSRSLETEDQIFDITLEQALAIYAQPKQRRGQRASSALRELGDD
PVSGKPVSVKDGRFGPYVTDGTTNATLRKDDEVESITPERAFELLAEKRAKGPAKKRTTA
RSSSRKAPAKSRS
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
gtgcccagctccgcccgcaagctcgtgatcgtcgagtcgccgaccaaggcgcgcacgatc
acgccgttcctcggtgacgactacgacgtcgaggcgagcgtcgggcacatccgggacctc
ccgcagccgtccgagctgcccgcggagatgaagaagggcccgtaccggaagttcgccgtc
gatgtcgagaacgggttcgacccgtactacgtggtcgacgctgacaagaagaagaaggtc
agcgagctccgcaagaagctcaaggcggccgacgagctctacctcgccacggatgaggac
cgcgagggcgaggccatcgcgtggcacctcctcgaggtgctggagccgaaggtgcccgtg
aagcggatggtgttccacgagatcacccgcgaggcgatccagcgggcgctggaggcgacg
cgcgacctcgacacgcgcctcgtcgacgcccaggagacccggcgcatcctcgaccggctg
tatggctacgaggtctcgccggtgctctggcgcaagatcgggccggggctctccgccggt
cgcgtgcagtccgtcgccacgaggctcgtggtggagcgggagcgcgagcggatggcgttc
cgcagcgcgaactactgggacgtgcgcggcgagttcagcggcgggcgcggcgagacggcg
ggcacgtcgttctccgcgcggctgacggcgctcgacggcgaccgggtcgccaccggccgc
gacttcgacgactccggctcgctcacgagcagggccgtccacctcgacgaggcggccgcg
acggcgctcgtctccgcgctcgacggggtcgacgtcgtcgtacgttccgtcgacaccaag
ccgtacacccgccgccccgccgccccgttcacgacgtcgaccctccagcaggaggcgagc
cgcaagctgcggatgaactcgcgcgcgacgatgcgcacggcgcagtcgttgtacgagaac
ggctacatcacgtacatgcggaccgactccgtgacgctctcgacccaggcgatcaccgcc
gcgcgccggcaggccgcggagctgtacggcgcggagtacgtgcccgatgcgccgcgcctg
tacgcgaacaagtcgaagaacgcccaggaggcgcacgaggcgatccggcccgccggcgac
tcgttccgcactcccgcccaggtcgcgagccggctctccggcgacgagttccggctctac
gagctcatctggaagcgcaccgtcgcgtcgcagatggctgacgcgaaggggtcgacggcg
tccgtgaagctcggtgcgagcgccgcctatcccgacggcgcgacccgcgacgccgagttc
tcggcctccggcaccgtcatcacgttccgcggtttcctcgcggcgtacgaggagggccgg
gacgcgggccggtacgacgaggacggcgacggcgcgggccgcggctcctcgtcggggtcg
tcggccgcgcgcgagacccgcctgccggatctcgcccagggcgaccaggtcgccgcggag
tcgctcaccgcggagggccacgacacctcacccccgccccgctacaccgaggccagcctc
accgccgccctcgaggagcgcggcatcgggcgtccgtccacgttcgccgccacgatctcc
gtgatcgtggatcgcggatacgtcctgcgccgcggacaggcgctcgtgccgagctggctg
gcgttctcggtggtccggctgctggaggaccacttcgggcggctcgtcgactacgacttc
acggccgcgatggagtccgacctcgaccgcatcgcgcgcggtgagcaggaccgcgtggcg
tggctgacccggttctacttcggcgacgaggcggccggctcggaggggctgcagcagctc
gtctccgagctgggcgacatcgacgctcgcggcatcaactcgatcgacctcggtggcggc
gtcaccgtacgggtcggccgctacggtccgtacctcgaggcgaccggaccggacggcgag
ccgcagcgcgcgagcgtgcccgacgacgtcgccccggacgagctgacgctcgagcgggcc
cgcgagctgctcgccacccagggcgagggcgaccgcgagctcggcaccgacccggcgacc
gggcgcaccatcgtggcgcgcagcgggcggtacgggccgtacgtcacggaggtcatcccc
gacgacgcccccgccgcctcggacgacgcgaagccggcgaagcgcaagccggccaagccg
aagccgcggacggcgtcgctgctgcagtcgatgcagctcgaggcggtggatctcgagcag
gcgctcaagcttctctccctgccgcgcgtggtcggcgtcgacccggagtcgggcgacgag
atcaccgcccagaacggtcggtacgggccgtacctcaagaagggcaccgactcgcgctcg
ctcgagaccgaggaccagatcttcgacatcacgctcgagcaggctctcgcgatctacgcg
cagcccaagcagcggcgcgggcagcgggcgtcgtcggcgctgcgcgagctcggggacgac
ccggtgtccggcaagccggtgagcgtgaaggacggacggttcgggccgtacgtcacggac
ggcacgacgaacgcgacgctccgcaaggacgacgaggtcgagtcgatcacgccggagcgc
gcgttcgagctccttgcggagaagcgggccaaggggccggcgaagaagcggacgacggcg
cggagctcgagccggaaggcgcccgccaagtcgcgctcctga
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