Beutenbergia cavernae: Bcav_1610
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Entry
Bcav_1610 CDS
T00893
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bcv
Beutenbergia cavernae
Pathway
bcv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Bcav_1610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcv03400
]
Bcav_1610
Enzymes [BR:
bcv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Bcav_1610
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Bcav_1610
DNA repair and recombination proteins [BR:
bcv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Bcav_1610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
PknG_rubred
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
ACQ79866
UniProt:
C5C3G7
LinkDB
All DBs
Position
1851797..1852729
Genome browser
AA seq
310 aa
AA seq
DB search
MPELPEVETVRAGLAAHALGRRIVRVDVAGERTTRRQAGGALALVDALEGASFTAAVRRG
KFCWLTLDTGRALLVHLGMSGQLLVRGAGQDAQDDPRHLRARIRFADDGELLFIDQRTFG
YLTSSDLVPTADGGPGGFGSDDPRLPLEVAGIARDLLDPALRIDELVTAVRTRRSAVKRA
LLDQSLVSGVGNIYADEALWRARVHPERATRGLPRLAVRSVLESAAGVMQDALAQGGTSF
DALYVDVNGASGYFDRSLSVYGQTGRPCPRCGTAIVRSEFMNRSSHWCPTCQPAPRGAAR
PVDRGAAARR
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagcttcccgaggtcgagacggtccgcgccgggctcgccgcccatgcgctgggt
cgccggatcgtccgcgtcgatgtcgccggcgagcgcacgacgcggcgccaggccggcggt
gccctcgcgctcgtggacgcgctcgagggcgcctcgttcaccgctgccgtgcggcgcggg
aagttctgctggctcaccctcgacaccggacgcgccctcctcgtccacctcgggatgagc
ggccagctgctcgtccgcggtgccggccaggacgcgcaggacgacccgcggcacctgcgc
gcccggatccggttcgccgacgacggcgagctgctcttcatcgaccagcgcaccttcggg
tacctcacgtcgtcggacctcgtgccgaccgctgacggcggcccgggcgggttcggcagc
gacgatccgcggctcccgctcgaggtcgccggcatcgcccgcgacctgctcgacccggcc
ctgcgcatcgacgagctggtgaccgccgtgcgcacccgccggagcgccgtcaagcgcgcg
ctgctcgaccagtcgctcgtgtcgggagtcgggaacatctacgccgacgaggcgctgtgg
cgcgcccgggtgcatccggagcgcgccactcgcggcctgccgcgcctggcggtgcgctcg
gtgctggagtccgccgccggggtcatgcaggacgcgctggcgcagggcggcacgagcttc
gacgccctgtacgtcgacgtcaacggcgcgagcgggtacttcgaccggtcgctctccgtg
tacgggcagacgggccggccgtgcccccggtgcggcacggcgatcgtgcggtccgagttc
atgaaccggtcctcgcactggtgcccgacgtgccagccggccccgcggggcgccgcgcgt
cccgtcgaccgaggagcggccgcgcgtcgatag
DBGET
integrated database retrieval system
