Beutenbergia cavernae: Bcav_1645
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Entry
Bcav_1645 CDS
T00893
Name
(GenBank) putative topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bcv
Beutenbergia cavernae
Brite
KEGG Orthology (KO) [BR:
bcv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcv03032
]
Bcav_1645
03400 DNA repair and recombination proteins [BR:
bcv03400
]
Bcav_1645
Enzymes [BR:
bcv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Bcav_1645
DNA replication proteins [BR:
bcv03032
]
Prokaryotic type
DNA Topoisomerases
Bcav_1645
DNA repair and recombination proteins [BR:
bcv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Bcav_1645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ACQ79901
UniProt:
C5C3Y8
LinkDB
All DBs
Position
1889856..1890836
Genome browser
AA seq
326 aa
AA seq
DB search
MRLRRSNVQGRGFRRARAGRGFTYTDPRGARVTDQATRARIEELAIPPAWQDVWISPHEN
GHIQATGVDAAGRTQYLYHAAWRAKRDRVKFDRALELAATLPAARRGVTRDLSAPEPTAA
RALAVAFRLLDTAYLRIGSERYASRHGSRGLATLLVRHVAVDGDVVELEFPGKSGVLWSA
RLEDARLARVVEEMRDRPARQRFLAWSERGSWTPLTPVEINDDVRARTGEEFSSKDFRTL
HGTVIAARALADAGPARTRRQRQERVVEAVRHTAATLGNTPAVARASYIDPRVVDRYQAG
EVIVVPSGGSAEAALRRLVLGDDAES
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgcgccgcagcaacgtccagggacgaggcttccggcgcgcccgtgccggacgc
ggcttcacctatacggatccgcgcggggctcgcgtgaccgaccaggccacgcgcgcccgc
atcgaggagctcgctatcccgccggcgtggcaggacgtgtggatctcgccgcacgagaac
gggcacatccaggccaccggcgtcgacgccgccggacgtacgcagtacctctaccacgcc
gcctggcgcgcgaagcgggaccgcgtgaagttcgaccgcgcgctggagctggccgcgacg
ctccctgccgcccgtcgcggggtgactcgcgacctctccgcaccggagccgacggcggct
cgggcgctcgccgtcgcgttccgcctgctcgacaccgcgtacctgcgcatcgggagcgag
cggtacgcctctcggcacggaagccgcggcctcgcgacgctcctcgtgcgtcacgtcgcc
gtcgacggcgacgtggtcgagctcgagttcccgggcaagagcggcgtcctctggtcggca
cggctcgaggacgcccggctcgctcgggtggtggaggagatgcgggaccgccccgcccgg
cagcggttcctggcgtggagcgagcgcggcagctggacgccgctcacgccggtggagatc
aacgacgacgtccgtgcccgcaccggggaggagttcagctcgaaggacttccggaccctg
cacggcacggtgatcgcggcacgcgccctggccgacgccggaccggcccgcacccgccgg
cagcggcaggagcgggtcgtcgaggcggtgcggcacacggcagcgacgctcgggaacacg
ccggccgtggcgcgcgcgagctacatcgacccgcgcgtcgtggaccgctaccaggccggg
gaggtcatcgtcgtaccctccggcggctcggcggaggccgcgttgcggcggctcgtgctc
ggcgacgacgccgagtcgtga
DBGET
integrated database retrieval system
