Beutenbergia cavernae: Bcav_1917
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Entry
Bcav_1917 CDS
T00893
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
bcv
Beutenbergia cavernae
Brite
KEGG Orthology (KO) [BR:
bcv00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Bcav_1917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcv03021
]
Bcav_1917
Transcription machinery [BR:
bcv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Bcav_1917
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
CDC27
Motif
Other DBs
NCBI-ProteinID:
ACQ80173
UniProt:
C5C5I2
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All DBs
Position
2184250..2185749
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AA seq
499 aa
AA seq
DB search
MPELPREFQHAALQDVVRHGRVHGRVAAEEFQAACSSAHVAPRRLATVLRAFVSLGIEIS
APAAPAAAAARSTTSSTAVVEDAPAPKRARATKTSSAASAKAAPKKGAVKPAAKTTSKTK
AAPAPSDETEEVELEEVDVAEDAVDVDDATEATEGDAAEGGAAKTAKTGTDETEDKGFVY
SDADDDDAPAQQVVTAGATADPVKDYLKQIGKVALLNAEQEVELAKRIEAGLFAEETLAA
GGSMEFKLRRELEWIAADGRRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLI
RAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQD
LGREPTPEELAKELDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAVVPAD
AVSFTLLQEQLHAVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGVTRERIRQIESK
TMSKLRHPSRSQVLRDYLD
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagctccctcgcgagttccagcacgccgctctccaggacgtcgtccgccacggc
cgtgtgcacgggcgggtcgccgctgaggagttccaggcggcgtgctccagcgcgcacgtg
gcgccccgtcgcctcgcgacggtgctgcgcgcgttcgtctcgctcgggatcgagatcagc
gcccccgctgcccccgcagccgcggcggcccggtccacgacgtcgagcaccgccgtcgtc
gaggacgcgccggccccgaagcgcgctcgcgccacgaagaccagctctgcggcgtccgcc
aaggccgcgccgaagaagggcgccgtcaagcccgccgccaagacgacctcgaagacgaag
gccgcccccgccccgagcgacgagaccgaggaggtcgagctcgaggaggtcgacgtcgcc
gaggacgcggtggacgtcgacgacgcgaccgaggcgaccgagggcgacgccgccgagggc
ggcgcggcgaagaccgcgaagaccggcacggacgagaccgaggacaagggattcgtctac
tccgacgcggacgacgacgacgcgccggcgcagcaggtggtcacggcgggtgcgactgcc
gaccccgtgaaggactacctcaagcagatcggcaaggtcgcgctgctgaacgcggagcag
gaggtcgagctcgcgaagcgcatcgaggccggcctgttcgcggaggagacgctcgccgcg
ggcggctcgatggagttcaagctgcgccgcgagctcgagtggatcgccgccgacgggcgt
cgggcgaagaaccacctgctcgaggcgaacctgcgcctcgtggtctccctggccaagcgc
tacaccggccgcgggatgctgttcctggacctcatccaggagggcaacctcggtctgatc
cgcgccgtcgagaagttcgactacaccaagggctacaagttctcgacgtacgccacgtgg
tggatccggcaggcgatcacccgcgcgatggcggaccaggcgcgcaccatccgcatcccg
gtgcacatggtcgaggtcatcaacaagctcgcccgcgtgcagcggcagatgctccaggac
ctgggccgcgagcccaccccggaggagctcgccaaggagctcgacatgaccccggagaag
gtcgtcgaggtccagaagtacggccgcgagccgatctcgctgcacaccccgctcggcgag
gacggcgacagcgagttcggtgacctcatcgaggactccgaggccgtggtgccggccgac
gccgtgagcttcacgctcctgcaggagcagctacacgcggtgctcgacacgctctcggag
cgcgaggccggcgtcgtctcgatgcggttcggcctgaccgacggccagccgaagacgctc
gacgagatcggcaaggtctacggcgtcacgcgcgagcggatccgccagatcgagtccaag
acgatgtcgaagctgcgtcacccgtcgcggtcgcaggttctgcgcgactacctggactga
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