Beutenbergia cavernae: Bcav_2399
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Entry
Bcav_2399 CDS
T00893
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bcv
Beutenbergia cavernae
Pathway
bcv03030
DNA replication
bcv03430
Mismatch repair
bcv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bcav_2399
03430 Mismatch repair
Bcav_2399
03440 Homologous recombination
Bcav_2399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcv03032
]
Bcav_2399
03400 DNA repair and recombination proteins [BR:
bcv03400
]
Bcav_2399
Enzymes [BR:
bcv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bcav_2399
DNA replication proteins [BR:
bcv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bcav_2399
DNA repair and recombination proteins [BR:
bcv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bcav_2399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ACQ80649
UniProt:
C5BW48
LinkDB
All DBs
Position
complement(2684874..2688446)
Genome browser
AA seq
1190 aa
AA seq
DB search
MPSAAPGSDFVHLHVHTDYSMLDGAARVPDLVAEVKAQGQSAVAITDHGYLFGAYDFWKR
ARAAGIKPIIGLEAYVTPGTARQDRSRVRWGERDQVGDDVAGGGAYTHLTLVSETTAGMH
NLFRMGSLASLEGYYFKPRIDRELMTRYSDGLIAFSGCPSGEIQTRLRLGQWDEAVRAAA
ELQDIFGKDSFYIELMDHSLELEKRVAKQLMELAAHLGAPLVATNDLHYVRDEDEHAHEL
LLCVQSNSLMSDPTYEQGGNRFALSGDGYYVRSSAEMRRLFAELPEACDNTLAIAERCEV
EFTEQVGRYMPHFPVPPGEDEISLFVKEVERGLVSRFGEHVPEDVAQQAKYEIEVITSKG
YAGYYLVVADFINWAKRNSIRVGPGRGSGAGSMAAYAMGITELDPLSNGLIFERFLNPER
MSLPDFDIDFDERRRGEVIRYVTQKYGEENVASIVTYGTIKAKQSLKDSGRVLGYPFAMG
EKLTKAMPPALMGKDVSLSGIFDPEDKRYAEAAEFRTLYETDPDARKVTDAAKGIEGLKR
QWGVHAAGIIISSEPLIDVIPIMRRDSDGAIITQIDFPAGEDLGLVKMDFLGLRNLTILE
DALVNIGINGKPDVVIEDVPLDDAATYELLGRAETLGVFQLDGSGMRQLLRLMRPDNFED
ISAVGALYRPGPMGANSHTNYALRKNGLQDIVPIHPELAGPLEEVLGPTYGLIVYQEQVM
AIAQHLAGYTLGEADLLRRAMGKKKKEILDKEYVPFSNGMKERGYSEGAIKALWDVLVPF
SDYAFNKAHSAAYGLISYWTAYLKVNYRVEYMAALLTSTRDDKDKSALYLNECRHLGITV
LPPDVNDSAANFTPVGEDIRFGLAAVRNVGANVVEAIAKAREEKGAFTSFTDFLDKVPAV
VCNKRTIESLVKAGAFDALGHTRRSLLLVHEQAVDAVIGVKRKEAEGQFDLFASLGGPAD
DAAGSVASFAVEIPDLPEWDKKQKLSFERQMLGLYVSDHPLAGVEHVLTAAADVSVATLL
ADEARPDGSTVTIAGLITSLQVKVSKQGNPWAAVVIEDLEGSIEVMFFGETYLAYSTVLA
EDTVVVLRGRVRRRDEQLQLQAMELSLPDLAGADTSPMTLQLPDARCTPPVVERLREILT
THPGGTEVHLRLTSPGRATVLRLEDALRVERSPALYGDLKALLGPGCLAS
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccgctgcacctggatccgacttcgtccatctccacgtgcacacggactactcg
atgctcgacggcgcggcccgggtgcccgatctcgtcgccgaggtcaaggcgcaggggcag
agcgccgtggccatcaccgaccacgggtacctgttcggtgcgtacgacttctggaagcgg
gcgcgcgccgcgggcatcaagccgatcatcggcctggaggcgtacgtcacacccggcacg
gcgcggcaggaccgttcgagggtgcgctggggtgagcgcgaccaggtgggcgacgacgtc
gcgggcggcggtgcgtacacgcacctgaccctcgtctccgagacgacggccgggatgcac
aacctgttccggatgggttcgctcgcgagcctcgagggctactacttcaagccgcgcatc
gaccgcgagctgatgacgcggtactcggacgggctcatcgcgttctcgggctgcccctcg
ggggagatccagacgcggctgcggctcgggcagtgggacgaggcggtgcgtgccgccgcg
gagctccaggacatcttcggcaaggacagcttctacatcgagctcatggatcactcgctc
gagctcgagaagcgcgtggcgaagcagctcatggagctcgcggcccacctgggtgcgccg
ttggtggcgacgaacgacctgcactacgtgcgcgacgaggacgagcacgcgcacgagctg
ctgctgtgcgtccagtccaactcgctgatgtcggacccgacgtacgaacagggcggcaac
cggttcgcgctgtccggcgacggctactacgtgcggtcgagcgccgagatgcggcgcctg
ttcgcggagctgcccgaggcgtgcgacaacacgctcgcgatcgcggaacgctgtgaggtg
gagttcaccgagcaggtcgggcggtacatgccgcacttcccggtgccgcccggcgaggac
gagatctcgctgttcgtcaaggaggtcgagcgcggcctcgtctcgcggttcggcgagcac
gtccccgaggacgtcgcgcagcaggcgaagtacgagatcgaggtcatcacgtccaagggg
tacgccgggtactacctcgtggtcgctgacttcatcaactgggccaagcggaactccatc
cgcgtcggccccggccgggggtcgggtgccggctccatggccgcctacgccatgggcatc
acggagctcgacccgctgagcaacggtctgatcttcgagcggttcctcaacccggagcgg
atgtcgctgcccgacttcgacatcgacttcgacgagcgtcggcgcggcgaggtcatccgc
tacgtcacccagaagtacggcgaggagaacgtcgcctcgatcgtcacgtacggcacgatc
aaggcgaagcagtcgctcaaggactcggggcgcgtgctcggctacccgttcgccatgggg
gagaagctcacgaaggcgatgccgccggccctcatgggcaaggacgtcagcctgagcggc
atcttcgacccggaggacaagcggtacgcggaggcggcagagttccgcacgctgtacgag
accgaccccgatgcgcgcaaggtcaccgatgccgcgaagggcatcgagggcctcaaacga
cagtggggcgtccacgcggccgggatcatcatctcgtccgagccgctgatcgacgtcatc
ccgatcatgcggcgcgactccgacggcgcgatcatcacgcagatcgacttcccggccggg
gaagacctcggcctggtgaagatggacttcctcgggctgcgcaacctcacgatcctcgag
gacgcgctcgtcaacatcggcatcaacggcaagccggacgtcgtcatcgaggacgtgccg
ctcgatgacgccgcgacgtacgagctgctcggccgggcggagacgctcggcgtgttccag
ctggacggcagcggcatgcggcagctcctgcgcctcatgcgcccggacaacttcgaggac
atctccgccgtgggcgcgctctaccgtcccggccccatgggtgcgaactcgcacaccaac
tacgccctgcgcaagaacggcctccaggacatcgtcccgatccacccggagctcgccggc
ccgctcgaggaggtcctcggccccacctacggactcatcgtctaccaggagcaggtcatg
gcgatcgcccagcacctggccgggtacacgctcggcgaggccgacctgctgcggcgcgcg
atgggcaagaagaagaaggagatcctcgacaaggagtacgtcccgttctcgaacgggatg
aaggagcgcgggtactccgaaggggcgatcaaggccctctgggacgtgctggtcccgttc
tccgactacgcgttcaacaaggcgcactcggcggcgtacgggctgatctcgtactggacg
gcgtacctcaaggtcaactatcgcgtcgagtacatggcggcgctgctcacgtccacgcgc
gacgacaaggacaagagcgccctctacctcaacgagtgccggcacctgggcatcaccgtc
ctgccgccggacgtcaacgactcggcggcgaacttcaccccggtcggcgaagacatccgg
ttcgggctcgccgcggtgcgcaacgtcggggcgaacgtcgtggaggccatcgcgaaggcc
cgcgaggagaagggggcgttcacctcgttcacggacttcctcgacaaggtgccggccgtc
gtctgcaacaagcggaccatcgagtcgctcgtcaaggcgggcgcgttcgacgcgctcggg
cacacgcgccggtcgctgctcctcgtgcatgagcaggcggtcgacgccgtgatcggcgtc
aagcgcaaggaggcggaggggcagttcgacctgttcgcctccctcggcggcccggcggac
gacgccgcggggagcgtcgcgtcgttcgccgtcgagatcccggacctgcccgagtgggac
aagaagcagaagctgagcttcgagcgccagatgctcggtctgtacgtctcggaccacccg
ctcgccggcgtcgagcacgtgctcactgccgcggcggacgtctccgtcgcgacgctgctc
gccgacgaggcccgcccggacggctcgacggtcacgatcgccgggctcatcacgagcctt
caggtcaaggtgtcgaagcagggcaacccgtgggccgccgtcgtcatcgaggacctggag
ggcagcatcgaggtgatgttcttcggcgagacctacctcgcgtactcgacggtgctggcc
gaggacacggtggtggtgctgcgcggtcgggtgcgccggcgcgacgagcagctccagctg
caggcgatggagctgtcgctgcccgacctcgccggcgctgacacgagcccgatgacgctc
cagctgcccgacgcccggtgcaccccaccggtcgtggagcggctgcgggagatcctcacc
acgcaccccggcggcacggaggtgcacctgcggctcaccagcccgggtcgcgccacggtg
ctgcggctcgaggacgcgctgcgggtggagcgctcgccggccctgtacggcgatctcaag
gcgctgctcggcccggggtgcctcgcctcgtga
DBGET
integrated database retrieval system
