Beutenbergia cavernae: Bcav_3054
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Entry
Bcav_3054 CDS
T00893
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bcv
Beutenbergia cavernae
Pathway
bcv03030
DNA replication
bcv03430
Mismatch repair
bcv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bcav_3054
03430 Mismatch repair
Bcav_3054
03440 Homologous recombination
Bcav_3054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcv03032
]
Bcav_3054
03400 DNA repair and recombination proteins [BR:
bcv03400
]
Bcav_3054
Enzymes [BR:
bcv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bcav_3054
DNA replication proteins [BR:
bcv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Bcav_3054
DNA repair and recombination proteins [BR:
bcv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Bcav_3054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ACQ81298
UniProt:
C5BZW8
LinkDB
All DBs
Position
3408199..3409050
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AA seq
283 aa
AA seq
DB search
MLAHMRWTDGPLVGFDTETTGVDVAHDRIVTAALVVRHGLQGLPQERTWIIDPGVEIPEA
ASAIHGVTTEHARRLGRPPAEALEEIAAALAAAIADGAAVVAFNASYDLTILEHELVRHH
LPTLHERLGRRPDAVLDPLVLDRALDRFRPGKRKLVDLAALYGVSTGELHAADVDVTATL
DVLRALVGRFPELAEVPLPQMHARQIRAHRGWALGFNRWLREQGFDHPGAETTWPYHDPF
APPSEEIEAIVAAAREAALARSIGLTAPAPRRAEPPMQEPRAS
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgctcgctcacatgcgctggaccgacggaccgctcgtgggcttcgacaccgagaccacc
ggtgtcgacgtcgcgcacgaccgcatcgtcaccgcggccctcgtggtgcggcacgggctg
cagggccttcctcaggaacgcacgtggatcatcgatcccggcgtcgagatccccgaggcg
gcgagcgccatccacggcgtcaccaccgagcacgctcgccggctcggccgtccgccggcg
gaggcgctggaggagatcgccgccgcgctggccgccgcgatcgccgacggcgcggccgtc
gtcgcgttcaacgcctcctacgacctgacgatcctcgagcacgagctcgtccgccatcac
ctcccgacgttgcacgagcggctcggccggcggcccgacgccgtcctcgaccccctggtg
ctcgacagagcgctcgaccggttccgccccggcaagcgcaagctcgtcgatctcgcggcg
ctctacggggtgagcaccggtgagctgcacgcggcggacgtcgacgtgacggcgaccctg
gacgtcctccgggcgctcgtgggccgcttcccggagctcgccgaggtcccgctgccccag
atgcacgcgcgccagatccgcgcccaccgtggctgggcgctcgggttcaaccgctggctc
cgggagcagggattcgaccacccgggcgcggagaccacctggccgtaccacgacccgttc
gcaccgccgtcggaggagatcgaggcgatcgtcgccgcggctcgcgaggcggcgctcgcg
cgctcgatcgggctcacggcgccggcgccccggcgcgccgagccgccgatgcaggagccg
cgggcgagctga
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