KEGG   Beutenbergia cavernae: Bcav_3906
Entry
Bcav_3906         CDS       T00893                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
bcv  Beutenbergia cavernae
Brite
KEGG Orthology (KO) [BR:bcv00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:bcv02048]
    Bcav_3906
Enzymes [BR:bcv01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Bcav_3906
Prokaryotic defense system [BR:bcv02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Bcav_3906
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N ResIII T1R_D3-like DEAD AAA_22
Other DBs
NCBI-ProteinID: ACQ82148
UniProt: C5C4M4
LinkDB
Position
complement(4325841..4329134)
AA seq 1097 aa
MHPSEADWEQFALEELAEHGWTPREGKSIAPGAPAVVDDEGLAIAERETWADLLIPSRLK
RAARKVNPDVPPAYLDQALATLTTPQSQDAIAENKRLHDAVVEGFRFTYLDDDGQERTPT
IRLVDADPDRNEWLAVNQVTVVSGDVERRFDVVLYLNGMPVGIIELKNAGTPHADVAAAH
AQLTTYVRELPLAFRFAVLTVASDGVTAKYGTPFTPLNHYSPWNVDDDGRVVGRSTAPGP
EDSRATDGITADIPEGDAATGDAGALALEVLIAGLFNTERFLQLLRGYVAFDSGDGGLSK
RIAKPHQYFAVSQAIATTIHAVETNGKAGVVWHTQGSGKSMEMELYANQVMRHPKLHNPT
IVVVTDRTELDGQLYETFNRSELLPEKPRQIVRRNELRDELGSRVTGGIYFTTLQKFGLS
KEEKDAGLAHPRLSDRPNIVVIVDEAHRSHYDDLDGYAWHLKNALPNATLIAFTGTPISF
ADRNTREVFGDVIHTYDLTRAVEDGATVPVYFESRLVKVGFSGDLTDDQINASADEVTVG
LDETERDRIEKSVAVVNAIYGAPARLEKLATDLVAHWEARRTAMAELVRSVDVDGGDVAP
GKALVVCATRDIAARLYEQIVAIRPGWHSADIHAGKVKVVYSGSATDQPPISDHVRRDSE
NAVIKKRLKDPTDELEIVIVKDMMLTGYDSPPLHTLYLDRPIRGALLMQTLARVNRTFRG
KNAGLLVAYAPIAEHLTAALAEYTDRDQEAKPVGKTVDDAVDVARQLIEELRAVLVGFDW
RADLRRRQSSGDKAAGLRTILAAVNWLRTPRRGDDATDGVTPSSTFRTLAGQLGRARAIS
GPEALADVDNEIRFYEEVRIWIGKLDAEERQARGEPIPDDVQRMLNELMAAAVESGEVLD
IYGAAGLEAPRLDRLDTDYLTRAQSAENPQLTIEALQNLIARESQTVTHGNLVRQRVFSV
RLSEVMAKYTNSNLTSAEVIAALIEVARDVSAEGDRGASFDPPLSTDELAFYDAVASNSS
AVEVQGTGVLAEIARELVAVVRRDAKTDWTVRDDVRAKLRSSIRRLLVKHGYPPDQQPEA
IKLVIEQMEAMAPRLAA
NT seq 3294 nt   +upstreamnt  +downstreamnt
atgcacccgagcgaagccgactgggagcagttcgccctcgaggagctcgccgagcacggc
tggacacctcgggagggcaagtccatcgcccccggcgcacccgcggtcgtggacgacgag
ggcctcgcgatcgccgagcgggagacctgggccgaccttctcatcccgtctcggctcaag
cgggcggcgcggaaggtcaaccccgacgtgcccccggcgtacctcgaccaggccctcgcc
accctgacgactccgcagtcgcaggacgcgatcgccgagaacaagcggctccacgacgcc
gtcgtcgagggattccgcttcacctacctcgacgacgacggccaggaacgcacccccacc
atcaggctcgtcgacgccgaccccgaccgcaacgagtggctcgccgtcaaccaggtgaca
gtggtgagcggtgacgtcgagcgccggttcgacgtcgtcctctacctcaacgggatgccc
gtcgggatcatcgagctcaagaacgccggcacccctcacgccgacgtcgcagcggcgcac
gcccagctcaccacctacgtgcgagagctgccgctggcgttccggttcgccgtcctcacc
gtcgcgagcgacggcgtcacggcgaagtacggcaccccgttcacgccgctcaaccactac
tcgccgtggaatgtggacgacgacggacgcgtcgtgggccgttcgacggcgccgggtccg
gaggacagccgggcgacggacggcatcaccgccgacatccccgagggcgacgccgcgacg
ggcgacgccggtgcactggcactcgaagtcctcatcgcgggcctgttcaacaccgagcgc
ttcctgcagctgctgcggggatacgtcgcgttcgactccggcgacggcggcctctccaag
cgcatcgcgaagccgcaccagtacttcgccgtctcgcaggcgatcgccacgaccatccac
gcggtcgagacgaacggcaaggccggcgtcgtctggcacacgcaggggtccggcaagtcc
atggagatggagctgtacgccaaccaggtgatgcggcacccgaagctgcacaacccgacg
atcgtcgtcgtcactgaccgcacggagctcgacggccagctctacgagaccttcaaccgc
agcgagctgctgccggagaagccccggcagatcgtgcgtcgcaacgagctgcgcgacgag
ctcggctcccgggtgaccggcgggatctacttcaccaccctgcagaagttcgggctctcc
aaggaggagaaagacgccgggctcgcgcacccgcggctctcggaccggcccaacatcgtg
gtcatcgtggacgaggcgcaccgcagccactacgacgacctcgacggctacgcgtggcac
ctcaagaacgccctcccgaacgcgacgctcatcgcgttcacgggtacgccgatctcgttc
gccgaccgcaacacacgcgaggtgttcggcgacgtcatccacacgtacgacctcacgcgg
gccgtcgaggacggtgccacggtgcccgtgtacttcgagtcccgcctcgtcaaggtgggc
ttcagcggagatctcacggacgaccagatcaacgcatcggcggacgaggtcactgtggga
ctcgacgagacggagcgggaccggatcgagaagtctgtcgccgtcgtcaacgcgatctac
ggcgcacccgcgcggttggagaagctagcgaccgatctcgtggcgcactgggaagcgcgt
cggacggcgatggcggagctcgtacgcagcgtcgacgtcgacggcggggacgtggctccc
ggcaaggctctggtcgtgtgcgccactcgtgacatcgccgcccggctctacgagcagatc
gtcgccatccgccccggctggcactcggcggacattcatgccgggaaggtcaaggtcgtc
tactccggttcggccacggaccagccacctatctcggaccacgtgcgccgcgactccgag
aacgccgtgatcaagaagcggctcaaggacccgaccgacgagctcgagatcgtgatcgtc
aaggacatgatgctcacggggtacgactcgccaccgcttcacacgctgtacctggaccgc
ccgatccgcggagccttgctgatgcagaccctcgcccgggtgaatcgcacgttccgcggc
aagaacgccggtctgctcgtggcgtacgcgccgatcgcggagcacctgacggccgcactg
gcggagtacacggatcgcgatcaggaggccaagccggtcggcaagacggtggacgacgcc
gtcgacgtcgcccgccagctgatcgaggaactgcgcgccgtgctcgttgggttcgactgg
cgcgccgacctgcgacgccgtcagtcctcgggtgacaaggccgcagggctccggacgatc
ctggccgcggtcaactggctgcgcacaccgcgccgaggcgacgacgccacggacggcgtg
acgccgtcgtccaccttccgcacgctcgcgggtcagctgggacgcgcccgcgcgatcagc
gggccggaggctctcgccgacgtcgataacgagatccgcttctacgaggaggtgcggatc
tggatcgggaagctggacgccgaggagcggcaggctcgcggggaaccgatccccgacgac
gtccaacggatgctgaacgagctcatggcggcagcagtggagtcgggcgaggtgctcgac
atctacggtgccgcggggctggaggcgccgcgcctggaccgcctcgataccgactacctc
acgcgcgcccagtccgccgagaacccacagctcacgatcgaagcactgcagaacctgatc
gctcgcgagtctcagaccgtgacccacggcaacctcgtgcgccagcgtgtgttctccgtc
cggctgagcgaggtgatggcgaagtacacgaactcgaacctcacgtcggcggaggtgatc
gcggcgctcatcgaggtggcacgcgacgtgtccgccgagggtgatcggggcgcgtcgttc
gacccgccgctctcgaccgacgagctcgccttctacgacgcggtcgcctcgaactcctcg
gcggtcgaagtccaggggacgggcgtacttgccgagatcgcgcgcgagctggtggccgtg
gtgcggcgcgacgccaagacggactggaccgtccgtgatgacgtgcgcgccaagctgcgg
tcctcgatccggcgcctgctcgtcaagcacggctacccgccggaccagcagcccgaagcc
atcaagctcgtgatcgagcagatggaggcgatggcgccgcgcctcgcggcgtga

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