Borrelia crocidurae: Q7M_396
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Entry
Q7M_396 CDS
T02051
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bcw
Borrelia crocidurae
Pathway
bcw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bcw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Q7M_396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcw03021
]
Q7M_396
03400 DNA repair and recombination proteins [BR:
bcw03400
]
Q7M_396
Enzymes [BR:
bcw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Q7M_396
Transcription machinery [BR:
bcw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Q7M_396
DNA repair and recombination proteins [BR:
bcw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Q7M_396
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AFI31175
UniProt:
I0FCG9
LinkDB
All DBs
Position
complement(406347..409814)
Genome browser
AA seq
1155 aa
AA seq
DB search
MIKRVHLGQGKAEEILNLPNLIEIQLNSYEKFLQLERLKNNKPLLNEGLESVFRDVFPMK
SSNGEVALEYEKYYIEYDSISFTEKECKRKGQSYEAVLKIRLNLQFLTTGEIRQKDVYMG
TIPLMTDRGTFIVNGAERVIVSQIHRSPGVVFYKEKDLYYARIIPYRGSWLEFEIDSKKD
YLYVKIDRKKRILVTLFLRALGLDTREKIIETFYKIRKIEVNDDTKREITGQYLATNITI
KENMTYRAGDKITLQDIEDFLQNGVKEINLIDFDGYDSVPGKHFISSDVILNCFEKEDAY
FALKDGFKELSRESVMLAVYSVLLPGEPISIDNAENDLRTVFFSEKRYDLGHVGRYKLSK
KFGLDDLTTSVLTMTDIVNTISHLLRIYDGHDVLDDIDHLGNRRVRSVGELLTNIYKGAM
SRVEKIAKDRMSNKEVFNLKPQELISVKPVVSAVKEFFATSQLSQFMDQVNPLAELTHKR
RLNALGPGGLSRDRAGFEVRDVHYTHYGRMCPIETPEGPNIGLIVSLATYSKVNDYGFLE
TPYRKVIDGKVTDDIEYLSAIDEEKKCIAQANASVSSDGNYTDDLVSVRISGDYTTMMPK
NIDYMDVSPRQLISVSSALIPFLEHNDANRALMGSNMQRQAVPLLFPQPPIVGTGMERIV
AKDSGVVIKAKRPGRVVLATNKKIVIKPDNATSEQDLDEYELYKYERTNQDTSFNHSVLV
KNGQIVNKDEIIADGPATRYGELALGNNLLVGFIPWNGFNYEDAILISERIVKEDLYTSI
HIKEFSIEVRETKLGPEKVTADIPNVSGKILSKLDENGIVRIGTYVKPGDILIGKVTPKS
EGDITPEFKLLTSIFGEKAKDVKNNSLKVPHGTEGTVIDVQRITKDDVGNLPPGVDEILK
VYIAKKRKLKEGDKMAGRHGNKGVVAKILPVEDMPYLADGTPLDICLNPLGVPSRMNIGQ
LMESQLGLAGKYLGEYYDVPVFESATNECIQEKLKKAGFNETSKAVLYDGYTGEPFENEV
MVGVIYMLKLHHLVDDKMHARSTGPYSLVSQQPLGGKAQFGGQRLGEMEVWALEAYGAAH
TLQELLTVKSDDMSGRVKIYENIVKGIPTNVSGIPESFNVLMQELRGLGFDLSIYDDNGN
QIPLTEKEEELINKT
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaagggttcatctaggacaaggaaaagccgaagaaatcttaaacttacctaac
ctaatagaaatacaattgaattcttatgaaaaatttttgcaacttgagagattaaaaaat
aataaacctttactcaatgagggccttgaatctgtgtttagagatgtttttcctatgaaa
agtagcaatggtgaggttgctcttgaatatgaaaaatattatattgaatatgattctatt
agctttactgagaaagagtgtaaaagaaaggggcaaagttatgaggctgttttaaagata
agattaaacttacagtttctaacaacaggagagataagacaaaaagatgtttatatggga
actattcctttaatgacagatagaggaacttttatcgttaatggtgcagaaagagtcatt
gtatcacaaattcatagatctccgggggttgttttttataaggaaaaagatttatattat
gctcgtattattccttatcgtggttcttggcttgaatttgagattgactcaaagaaagat
tacctttatgttaagatagacagaaaaaaaagaatattagttactcttttcttaagagct
ttaggtcttgatactagagaaaaaataatagagactttttataagattagaaaaattgaa
gtaaatgatgatactaaaagagagattacaggacagtatttagctacaaacattactata
aaagaaaatatgacttatcgggcaggtgataagataactttgcaagatattgaagacttt
ttgcaaaatggagttaaagaaataaacttgattgattttgatgggtatgatagtgttcct
ggaaaacatttcattagttccgatgttattttaaattgttttgaaaaagaagatgcttat
tttgctttaaaagatggatttaaggaactttcacgagaatccgtgatgcttgcagtttat
agtgtacttttgcctggtgaaccaatatcaattgacaatgctgagaacgatttaagaact
gtatttttttcagaaaaaagatatgatttgggtcatgtaggaagatataaactttctaag
aagtttggtcttgatgatcttacaacatcagttcttactatgacagatatagtaaatact
atatctcatcttttaagaatatatgatgggcatgatgttcttgatgatatagatcatctt
ggaaatagaagagtgcgttctgttggtgagttacttacaaacatatataaaggtgcaatg
tcaagagtagaaaaaattgcaaaggacagaatgtctaataaagaagtattcaatttgaaa
cctcaagaattaattagtgttaagcccgttgtttctgctgttaaagaattttttgcaacc
agtcagctttctcagtttatggatcaggttaatcctttagccgaacttactcataagaga
cgtcttaatgcattgggtcctggtggactctcaagggatcgagcaggttttgaagtaaga
gatgtacattatactcattatggtaggatgtgtcctattgaaactcctgaaggcccaaat
attggacttattgtttctttggctacttattcaaaagtgaatgattatggtttcttagaa
actccttataggaaggtgattgatggtaaggtaactgatgatattgaatatttgtctgct
attgatgaggaaaaaaaatgtattgcgcaagcaaatgcttctgttagttctgatggtaat
tatactgatgatttggtgtctgttaggatttctggtgattatactacaatgatgcctaaa
aatatcgattacatggatgtttcgcctagacaattaatatctgtctcttcggcgttaata
ccttttcttgaacataatgatgcaaatcgtgctcttatgggttcgaatatgcaacgtcag
gcagttcctttattatttccacagccacctattgttggtacaggtatggagaggatagtt
gcaaaagactctggtgttgttattaaagcaaaaagacctggtagagttgtcttagctaca
aacaaaaagatagttattaaacctgataatgcaacttctgaacaagatttagatgaatat
gaactttataaatatgagagaacaaaccaggatacttctttcaatcattcagttttggtg
aagaatggccaaattgttaataaagatgagataatagcagatggtcctgctactagatat
ggagaattggcgcttggtaataatttgttagttggttttattccgtggaatggatttaat
tatgaggatgctattttaatttctgagagaattgtaaaggaagatctttatacttcaatt
catattaaagaatttagcattgaagtaagagagactaagcttggacctgaaaaagttacg
gctgatattcctaatgttagtggaaagatattgagtaaacttgacgaaaatggaattgta
agaatagggacttatgtaaaaccaggtgatattttaattggtaaagttactccaaaatca
gaaggagatattacccctgaatttaaacttttaacttctatatttggtgagaaagcaaag
gatgttaagaataattcattaaaagttcctcatggtactgaaggaactgtaattgatgtt
caaagaattactaaagatgatgttggcaatcttccacctggtgtggatgaaatattaaag
gtttatattgccaaaaaaagaaaacttaaagaaggtgataaaatggcaggaagacatgga
aataagggtgtagttgcaaagattcttcctgttgaagatatgccatatcttgcagatggg
acccctcttgatatatgcttgaatcctttgggagtgccatctcgtatgaatattggacaa
ttgatggaatctcagcttggtcttgctggtaagtatcttggcgaatattatgatgttcct
gtttttgagtctgctacaaatgaatgtattcaagaaaagttaaaaaaagctggatttaat
gagacttcaaaggcagtcttgtatgatggatatacaggtgaaccatttgaaaatgaagtt
atggttggagttatatatatgttgaaacttcatcatcttgttgatgataagatgcatgca
aggtctacaggcccttattcacttgtatctcaacaacctcttggaggaaaagctcaattt
ggtggacaaagacttggagagatggaagtttgggctcttgaagcttatggagctgcgcat
actttgcaagaattattaacagtaaagtcagatgatatgtcaggaagagttaagatatat
gaaaatattgttaagggcattcctactaacgtatctggaattcctgaatctttcaatgtt
ttgatgcaggaactaagaggtcttggttttgatttatctatttatgatgataatggaaat
caaattcctttaacagaaaaggaagaggaattaattaataagacttag
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