Borrelia crocidurae: Q7M_632
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Entry
Q7M_632 CDS
T02051
Name
(GenBank) Transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bcw
Borrelia crocidurae
Pathway
bcw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bcw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Q7M_632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcw03400
]
Q7M_632
Enzymes [BR:
bcw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Q7M_632
DNA repair and recombination proteins [BR:
bcw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
Q7M_632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CarD_TRCF_RID
UvrB_inter
UB2H
Cas3-like_C_2
TsaE
Motif
Other DBs
NCBI-ProteinID:
AFI31411
UniProt:
I0FD55
LinkDB
All DBs
Position
complement(655225..658179)
Genome browser
AA seq
984 aa
AA seq
DB search
MNIEKELTTKLKNNQNLQKMQKFIEQNIHFTLTGYEKFFKAFLIHKIKKYSNNKVILIVK
NENISDEIKNDLTQITDQIYELNYFSPLIYKGIGSKSKVFCDRVKFLINFYENNPGIYIV
SLKSLLSKIPTKKDLFNNIYKIQTDKIINIENFEKKLIKMGYEKTMRVTLPGEFTINNKT
IDIHSFNHKEPTRISLNNDKIKQINYFNPLNQLKQKNVIYEFNIIPKKEIIWNKENIDKL
KNYIKESEYKQFFKQIETKYNARTEEVFYPLLGETLLSQEINENTITINFEIPNLKEEIK
QIYKEYDRLYTQAIESDIKLVSPKEIFINPNDLKLKTNIYFIKTPINQQTEKPTKEIIEF
KIESERRFFSNIVLAKQEIQNWIDNGFQVIITAESNSQKEKLKYIFQDIPKIKVEVIKIS
SSLIINEEKIAIITEADIFNKKQKTNKTFESSKTKPIDSFIEVEKNSHIVHINHGIGIFR
QIKRIKTSLIEKDYIEIEYADNEKLFIPIEQTHLIQKYIGNETQNIKLDRISSKTWEKKK
IYATKKIDKIADQLVSLYAERENITGFQYPQDDEWQLLFESEFPYDETPDQLTAISEIKQ
DMMSPKVMDRLLCGDVGFGKTEVAMRAAFKAVMGKKQVAILSPTTILTEQHFNTFKKRFK
NFPIQIAMISRFITKSKEKEILRNLETGNIDIIIGTHKILSKKIKYKDLGLIIIDEEQRF
GVKEKEKLKEIKVSVDSLALSATPIPRSLHMSLIKLRDISVLKTPPQNRIKIETYVEEFS
EILIKHAIENELSRDGQVFFVHHNIQELDSIKAMIEKVVPYARIATIHAKLTGEQIENIM
QDFINKSYQVLLATTIIENGIDIENANTIIINNANRFGLAQLYQLRGRVGRSSKKAFAYF
LYKENSNLNEGAIERLRAISEFSELGAGFQIAMKDMEIRGVGNLLGREQHGEIESIGLDY
YLTMLNKAIEKRMGKNSKKKRNQH
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgaatatagaaaaagaattgaccaccaaattaaaaaacaatcaaaatttacaaaaaatg
caaaaatttattgaacaaaatatacattttacactaacaggatacgaaaaattttttaaa
gctttcttaattcacaaaataaaaaaatatagtaataataaagttatactaatagttaaa
aatgaaaatatatcagatgaaattaaaaatgatttaacacaaatcacagatcaaatatac
gaacttaattacttcagccctcttatatacaaaggaattggctcaaaaagtaaagttttc
tgtgatcgagtaaaatttttaatcaacttttatgaaaataatcctggcatatatattgtt
tcattaaaatccctacttagtaaaattcccacaaaaaaggatctatttaataacatatat
aaaatccaaacagataaaataattaacatagaaaattttgaaaaaaaacttataaaaatg
ggatacgaaaaaacaatgagggttacattacccggagaatttacaataaataacaaaaca
atagatatacattcatttaatcacaaagaaccaacaagaatttcacttaataatgacaaa
ataaagcaaatcaattatttcaatcccctaaatcaattaaaacaaaaaaatgttatttat
gaatttaacataattccaaaaaaagaaataatttggaacaaagaaaacatagataaatta
aaaaactacatcaaagaatctgaatataaacaattctttaaacaaatcgaaacaaaatac
aacgcaagaacagaagaagtattttatccattattaggagagactctcttaagtcaggaa
ataaatgaaaatacaattactataaattttgaaataccaaatttaaaagaagaaatcaaa
cagatatataaagaatacgataggctctacactcaagcaatagaatcagacataaaacta
gtatcaccaaaagaaatctttataaatcccaacgatttaaaattaaaaaccaatatatat
tttataaaaactcctataaatcagcaaacagaaaagcctacaaaagaaattatagaattt
aaaattgagagcgaacgtagatttttttcaaatattgtacttgcaaaacaagaaatacaa
aattggattgataatggatttcaagtaattattacagcagaatccaactcacaaaaagaa
aaattaaaatacatttttcaagacatacctaaaatcaaagttgaagttattaagatatca
agctctcttataataaacgaagaaaaaatagctattattactgaagcagatatctttaac
aaaaaacaaaaaacaaataaaactttcgaatcatcaaaaacaaaacctatagattcattt
attgaggttgaaaaaaatagtcatattgtccatataaatcatggaattggaatatttaga
caaataaagagaatcaaaacaagtcttattgaaaaagactatattgaaattgaatatgct
gataatgaaaaattatttattcctattgaacaaacacaccttattcaaaaatacattggc
aatgaaactcaaaatataaaactagatagaatcagttcaaaaacttgggaaaagaaaaaa
atttatgcaacaaaaaaaattgataaaattgcagatcaacttgtttcactttatgcagaa
agagaaaatattacaggatttcaatatcctcaagatgatgaatggcaattattatttgaa
tcagaatttccatatgatgagactccagatcaattaacagcaatatcagaaatcaaacaa
gatatgatgagcccaaaagtaatggacagacttttatgcggagacgttggatttggaaaa
actgaagttgcaatgagagcagcatttaaagctgttatggggaaaaaacaagtagcaata
ctatctccaacaacaattcttacagaacaacacttcaatacatttaaaaaaagatttaaa
aatttcccaattcaaattgcaatgattagcagatttataacaaaatcaaaagaaaaggaa
attcttcgcaatttagaaacaggaaacattgacataataattggaacacataagatatta
tcaaaaaaaataaaatataaagatttgggtctcattattattgatgaagaacaaaggttt
ggtgttaaagaaaaagaaaaactaaaagaaataaaagtctctgtcgattctcttgcatta
tcagcaactccaattcctcgttctcttcacatgtcattaatcaaactaagagacatttct
gttttaaaaactccaccccaaaacagaattaaaatagaaacttacgttgaagaatttagt
gaaatattaattaaacatgcaatcgaaaatgaactatcaagagatggacaagtttttttt
gtacaccataatattcaagaactagattcaataaaagcaatgatagaaaaagtagtccct
tatgcaagaattgcaactatccatgcaaaacttacgggtgagcaaattgaaaacattatg
caagattttataaataaatcatatcaagtattactagcaacaacaattattgaaaatgga
atagatattgaaaatgcaaatacaataatcatcaacaatgcaaatagatttgggcttgca
caattataccaactaagaggaagagttggcagaagttcaaaaaaagcatttgcttatttt
ttatataaagaaaattcaaatctcaatgaaggcgccattgaaagactaagagcaatatct
gaattttcagaacttggagcaggatttcaaattgcaatgaaagacatggaaataagaggc
gttggtaatttacttggaagagaacaacacggagaaattgaatctattggactagattat
tatttaacaatgctaaataaagcaattgaaaaacgtatgggaaaaaattcaaaaaaaaaa
cgaaatcaacattga
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