Bacillus cytotoxicus: Bcer98_0097
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Entry
Bcer98_0097 CDS
T00560
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bcy
Bacillus cytotoxicus
Pathway
bcy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bcy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Bcer98_0097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcy03021
]
Bcer98_0097
03400 DNA repair and recombination proteins [BR:
bcy03400
]
Bcer98_0097
Enzymes [BR:
bcy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Bcer98_0097
Transcription machinery [BR:
bcy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Bcer98_0097
DNA repair and recombination proteins [BR:
bcy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Bcer98_0097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Apocytochr_F_C
Peptidase_M23
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
ABS20471
UniProt:
A7GK13
LinkDB
All DBs
Position
118271..121885
Genome browser
AA seq
1204 aa
AA seq
DB search
MIDVNNFEYMKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPQKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTESGDTPLDKKQLLSEKEYRAYRDRYGNTFQAAMGAEAIKKLLQ
DIDLDKEVDFLKEELKTAQGQRRTRAIKRLEVLESFRNSGNKPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERVQPEVWDVLESVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSSEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERAGAIGEGMVFKDTNEALLAYQNGYVHLHTRIAVP
ASSVNNNETFTEEQKGKLLLTTVGKLIFNEILPKSFPYINEPTKSNLEKETPAKYFVDKG
ANIKEVIASREEVAPFNKKILGNIIAEVFKRFKITETSRMLDRMKDLGFKYSTKAGITVG
VADILVLGEKDEILHEAQAKVDKVIKQFRRGLITEEERYDRVISIWSNAKDVIQGKLMKS
LDKRNPIFMMSDSGARGNASNFTQLAGMRGLMANPSGRIIELPIKSSFREGLTVLEYFIS
THGARKGLADTALKTADSGYLTRRLVDVAQDVIVREDDCGTDRGLLIGAIKEGNEVIESL
YDRLVGRFARKTVKHPETGEVLIRENELITEDIARAIENAGVETVHIRSAFTCNTRHGVC
KKCYGRNLATGTDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEI
FEARNPKGQAVISEIDGVVVTINDVKDRQEVVVQGAVETRTYAIPYGARLKVTPGQEISH
GQELTEGSIDPKELLKVTDITAVQEYLLREVQKVYRMQGVEIGDKHVEVMVRQMLRKVRV
IDAGDTDVLPGTLLDIHQFTDANVKVLLEGKQPATARPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMNRYRKVDLVKTVQDDTNVENDEI
YVEQ
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
ttgatagatgtaaataactttgaatatatgaagattggacttgcttcgcctgacaagatt
cgttcttggtcatacggtgaagttaagaaacctgaaacaattaactatcgtacgttaaaa
cccgaaaaagatggcttgttctgtgagcgcattttcgggccccaaaaggactgggaatgt
cactgtggaaaatataaacgcgtacgttataaaggtgtagtctgtgatcgatgtggtgtt
gaagtaacgcgtgcgaaagttcgtcgtgaacgtatgggtcatatcgaattagctgctcct
gtatctcatatttggtatttcaaaggtatcccgagccgcatgggacttgtcttagacatg
tcccctcgcgcgcttgaagaagtaatttatttcgcttcttatgttgtaacagaaagtgga
gatacaccacttgataagaagcaattgctttctgaaaaagaataccgtgcatatcgcgat
cgatatggaaacacattccaagctgctatgggtgcagaagcaattaagaagttactacaa
gatatcgatttagataaagaagtagacttcttaaaagaggaattaaaaacagcacaagga
caacgtcgtactcgtgctattaaacgtctagaagtattggaatcattccgtaactctgga
aataaaccatcttggatgatcttagatgttcttccggttattccgccagaattacgccca
atggtacagttagatggtggacgttttgcaacttctgacttaaacgatttatatcgtcgt
gttattaaccgtaacaatcgtttaaaacgtttattggacctaggtgcaccaagcattatt
gttcaaaacgaaaaacgtatgttgcaagaagctgtagatgcattaatcgataacggtcgc
cgtggtcgcccagttactggaccgggtaaccgtccgttaaaatcactatctcacatgctg
aaaggtaaacaaggacgtttccgtcaaaacttacttggtaaacgtgttgactactctggt
cgttctgttatcgttgtaggaccgaacttaaaaatgtatcaatgtggattaccaaaagaa
atggcgctagaactatttaaacctttcgtaatgaaagaactagtggaaaaaggattagca
cataacattaagagtgcaaaacgtaaaattgagcgtgtacaacctgaagtttgggatgtt
ttagagtcagttattaaagaacacccagtacttctaaaccgtgccccaacgcttcaccgt
cttggtattcaagcgttcgaacctacattagtagaagggcgcgcaattcgtcttcatcca
cttgtatgtacagcatacaatgcggactttgacggtgaccaaatggcggttcacgttccg
ctatcatcagaagcacaagcagaagctcgtcttcttatgttagctgcacaaaacattttg
aacccgaaagacgggaaaccagttgttacaccatctcaggatatggtattaggtaactac
tacttaacacttgagcgcgcaggtgcaattggtgaaggtatggtgttcaaagatacaaac
gaagcattgcttgcataccaaaatgggtatgttcatcttcatactcgtattgctgttcct
gcaagttcagtgaacaacaacgagacatttacagaagaacaaaaaggcaagcttctatta
acaactgttggtaaattaatatttaacgaaatcttaccaaagtcgttcccttatattaac
gaaccaacaaaatcaaatcttgaaaaagaaacacctgcgaaatatttcgttgataaaggt
gcgaatataaaagaagttattgctagccgtgaagaagtagcaccatttaacaagaaaatc
cttggtaatatcattgcggaagtatttaaacgtttcaaaattacagaaacatctcgtatg
cttgaccgcatgaaagacttaggatttaaatactctacaaaagctggtattacagttggg
gtagcagatatccttgtattaggtgagaaagatgaaattcttcatgaagcacaagcaaaa
gtagataaagtaattaaacaattccgtcgcggtttgattacagaagaagaacgttacgat
cgcgttatctctatctggagtaatgcaaaagatgttatccaaggaaaattgatgaaatcc
ttagataagcgcaacccaatcttcatgatgagtgactctggtgcccgtggtaacgcatcg
aacttcactcagcttgctggtatgcgtggtttgatggctaacccatctggtcgtatcatt
gagcttccaatcaaatcaagtttccgtgaaggtctaacggtacttgaatacttcatctct
acacacggtgcgcgtaagggtcttgccgatacagcgcttaagactgccgattctggttac
ttaacacgtcgtcttgtagatgttgcacaagatgttatcgttcgtgaagacgattgtgga
acagatcgtggtctattaatcggtgcgattaaagagggcaatgaagttattgagtcatta
tacgaccgtcttgtaggacgttttgcaagaaaaactgtaaaacatcctgaaacaggtgaa
gtgttgattcgtgaaaatgaattaattactgaagatatcgctcgtgctattgaaaatgca
ggtgtggaaacagtacacatccgttcagcatttacatgtaatactcgccacggcgtatgt
aagaaatgttacggccgtaacttagctactggtacagacgtagaagtaggggaagcggta
ggtattatcgcagctcaatctatcggtgagccaggtacacagttaacgatgcgtacgttc
catacaggtggggttgccggagacgatatcacacaaggtttacctcgtatccaagagatc
ttcgaagctcgtaatccgaaaggtcaagcggttatcagcgaaatcgacggtgttgttgta
acgatcaacgatgtgaaagatcgtcaagaggtagttgtacaaggtgcagtagaaactcgc
acatatgcaattccttacggcgctcgtctgaaagtaactccaggccaagagattagtcac
ggacaagagttaacagaaggttctattgatccgaaagaattactaaaagtaacggacatt
acagcagttcaagaatacttactacgtgaagttcaaaaagtataccgtatgcaaggggta
gaaattggcgacaaacacgtagaggtaatggttcgtcaaatgcttcgtaaagttcgtgta
atcgatgcgggtgacacggatgtattaccaggaacgttgctagatattcaccaatttact
gatgcaaacgtaaaagtattattagaaggtaaacaaccagcaacagctagaccggttctt
cttggtattacgaaagcttcacttgaaacagattcattcttatctgcagcttcgttccaa
gaaacaactcgtgttctaacagatgccgcaattaaaggcaaacgcgatgagcttctagga
ttaaaagagaacgttattatcggtaagcttgttccggctggaacaggtatgaatcgttat
cgcaaagtagatcttgtaaaaacagtgcaagacgatacgaatgtagaaaacgatgaaatt
tacgtagaacagtaa
DBGET
integrated database retrieval system
