Bacillus cytotoxicus: Bcer98_0859
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Entry
Bcer98_0859 CDS
T00560
Name
(GenBank) ATP-dependent nuclease subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bcy
Bacillus cytotoxicus
Brite
KEGG Orthology (KO) [BR:
bcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcy03400
]
Bcer98_0859
Enzymes [BR:
bcy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bcer98_0859
DNA repair and recombination proteins [BR:
bcy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Bcer98_0859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
AAA_16
AAA_22
SLFN-g3_helicase
DEAD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ABS21194
UniProt:
A7GM36
LinkDB
All DBs
Position
975306..978818
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AA seq
1170 aa
AA seq
DB search
MSLRFVIGRAGSGKSTLCLREVQEELKERPRGKTILYLVPEQMTFQTQQALIGSEEVRAS
IRAQVFSFSRLAWKVLQEVGGASRLHIDEAGVHMLLRKIIESRKEGLYVFQKAAEQNGFF
EHLGGMIAEFKRYNITPSHVYEMWQQLDAHSSSAEQKLLANKIYDLQLLYDDFERALIGK
YLDSEDYLQLLIEKLPFSEYVKDAEIYIDGFHSFSPQELEIIRQLMRCGARMTITLTVDE
KTFAQPVNELDLFYETVLTYEKVKQVAREEKVVMEKTISLVEQPRFHSPALAHLEAHYES
RPNEKFYGETSIAIHTAANLRAEVEGVAREIRRLVAEENYRYRDIAVLLRNGESYYDVLR
TLFADYDIPHFIDEKRSMSHHPLVECIRSALEIISGNWRYDAVFRCVKTELLYPLDVKKE
VMREEMDEFENYCLAYGVQGKKWTADEPWTYRRYRSLDEGNEVITDRERQMEEKMNRLRE
IVRTPIIRLQKRLKRASTVMQMCEAVYLFLEELDVPKKLEQLRVRAEESGDFLFATDHDQ
VWEEVMNLLDTFVEMLGEESMSLSVFIDVMTTGLEALQFANIPPSLDQVLIANIDRSRLS
NIRATFVIGANEGVMPATPTDEGMLSDEERDVLAAAGVELAPTTRQTLLEEQFVLYQMVT
RASEKLYISCPLADEEGKTLLASSFMKKIKRMFPNVKETFVTNDVNDLSRAAQISYVTTP
EVTLSYVMQQLQTWKRYGFEGDLDFWWDVYNFYVTSDEWKQKSNRVLSSLFYRNRAKKLS
TAVSRILYGDKIKGSVSRMELFNRCAYAHFAQHGLSLRERDIFKLDAPDIGELFHAALKK
IADKLLREKRTWADLSIKECEHLSILVIEEIAPLLQRQILLSSNRHAYLKQKLQQIIFRT
SLVLREHAKASGFVPVDLEVPFGMGGKDSLPPMEFTLSNGVKMEVVGRIDRVDKAEDESG
TFLRIIDYKSSSKALDLTEVYYGLALQMLTYLDVVISNAGTWMKQGEVASPAGVLYFHIH
NPLVEVKGDASEEEIEKEILKKFKMKGLVLGDADVVRLMDNKLSTGSSDIISAGLKKDGS
FSARSNIASEQEFSVLQKYVHHTFETIGKDITEGVIDIAPYKMGNKAACTFCHFRSVCQF
DESLEDNQFRTLKDMKDSEAMEKIREEVGE
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttcgatttgtgattggaagagctggaagtgggaaaagtacactttgtttacga
gaagtgcaagaagagttaaaagagcgcccaagagggaaaacaatcttgtatcttgttcct
gaacaaatgacatttcagacgcagcaggcgttaataggaagtgaagaggtaagagcttct
attcgtgcacaagtgtttagtttttcacgattagcttggaaagtgttgcaagaagtagga
ggggcaagtcgtcttcatattgatgaagcgggtgtgcatatgttacttcgcaaaattatt
gaatcgcgcaaagaaggattatatgtgtttcaaaaagccgctgaacaaaatggcttcttt
gaacatcttggaggtatgattgcagagtttaaacgttacaatataacgccatctcatgta
tatgaaatgtggcaacagttagatgcgcatagcagtagcgccgaacaaaagttgctggca
aataaaatatatgatttgcagctattatatgatgattttgaacgagctttaattggaaag
tatttagattcggaagattatttacagctccttattgagaaactgccgttttctgagtat
gtaaaggatgcagaaatttatattgatggatttcattcgttctccccgcaagagcttgaa
attataaggcagctaatgagatgcggagcaagaatgacgattacattaacggtggatgaa
aaaacgttcgcccagccagtcaatgaactggatttgttttatgaaacagtgctgacgtat
gaaaaagtaaaacaagtagcacgtgaagagaaagtggtaatggaaaaaacgatttcgctc
gtagaacagccgcgatttcattctccagcattagcgcatttagaagctcactatgaatcg
cgtccgaacgaaaagttttacggagagacgagtattgccatccatacagctgcgaattta
cgagcggaggtagaaggagtagcgcgagaaattcgtagacttgttgcagaagagaattat
cgataccgcgatattgccgtacttcttcggaacggagaaagctattatgatgtgttaaga
acattatttgcagattatgatattccgcatttcattgatgaaaagcgctcgatgtctcac
catccgttagtcgaatgtattcgttctgctttagaaataattagtgggaattggcgttat
gatgctgtttttcgctgcgtgaaaacagaacttttatatccgctggatgtaaaaaaagaa
gtgatgcgtgaagaaatggatgagtttgaaaactactgtttggcgtatggtgtccaaggt
aagaaatggaccgccgatgagccgtggacgtatcgtcgttatcgctctcttgatgagggg
aacgaggtgataacagatcgtgaacgccaaatggaagagaaaatgaaccgtcttcgtgag
attgtaagaacgccaatcattcgtctgcaaaaaagattgaaacgtgcaagtactgttatg
caaatgtgcgaagctgtatatttatttttagaggagctagatgttccgaagaaattagaa
caactacgtgtacgtgctgaagaaagcggggatttcttatttgcgacagaccatgatcaa
gtgtgggaagaagtgatgaatcttcttgatacatttgttgagatgcttggagaagaaagt
atgtctctatcggtgtttattgatgtgatgacgacagggcttgaggcacttcaatttgcc
aatatcccgccatcgttagaccaagtattaattgcaaatatcgatcgctctagactttca
aatattcgggcaacatttgtgattggtgcaaatgaaggtgtgatgccagctacgccgaca
gatgaagggatgctttctgatgaagaaagagatgttcttgcagcagcgggcgtggaatta
gcaccaacgacaagacaaacgttattagaagaacagtttgtcttgtatcaaatggtgaca
agagcatctgagaaactatatatctcttgtcctcttgcagatgaagaaggaaagacatta
ctagcttctagttttatgaagaaaataaagagaatgtttcctaatgtgaaagagacgttt
gtaacaaacgatgtaaacgacttatcgcgcgcagcacaaatttcatatgtaacgacgcca
gaagtaacattgtcatatgtgatgcaacaactgcaaacgtggaagcgatacggttttgaa
ggtgatttagacttttggtgggatgtatataatttctacgttacatccgatgaatggaag
caaaaaagcaaccgtgtattatccagtttgttttatcgaaatcgtgcgaagaaattaagt
acggctgtaagtcgaattttatatggagataaaataaaaggaagtgtctctcgtatggaa
ttatttaatcgctgtgcgtacgctcattttgcacagcacggtttatcattgagagagcgc
gatatatttaaattagatgcaccagatatcggggagctgttccatgcagcgctaaagaaa
attgcggacaagctcttgcgtgaaaaacggacttgggctgatttatccataaaagaatgt
gagcatctttccatattagtaatagaagaaattgctccattattacaaaggcaaatttta
ttaagctcaaatcgacatgcttatttgaaacaaaaattacagcaaattatttttagaaca
tcgcttgtgcttagggaacatgctaaggcgagtggatttgttccagttgatttagaagtt
ccgtttggtatgggaggcaaagactcattaccaccgatggaatttacattatcaaacggt
gtgaaaatggaagttgtcggccggattgatcgagttgataaagcggaagatgagagcggt
acgtttcttcgcattattgattataaatcgagctcgaaagcgctggatttaacagaagta
tattacggattagcattgcaaatgctgacgtatttggatgtcgtcatttctaatgctggt
acgtggatgaaacagggggaagtcgcatcaccagcaggtgtgttatacttccatattcat
aatccacttgttgaggtgaaaggtgacgcttctgaagaggagattgagaaagaaatttta
aagaaatttaaaatgaaagggctcgtgcttggagatgcagatgttgttcgtttaatggat
aacaaactatcaacaggaagctctgacattatttcagccgggttaaaaaaagacggaagc
ttcagcgcacgctctaacatcgcaagtgaacaagaattttctgtgctacaaaaatacgta
caccatacgtttgaaacgatcggaaaagacattacagaaggtgtcattgatattgctcca
tataaaatggggaataaagcagcgtgcacattttgtcacttccgctctgtctgccagttc
gatgaatcgctggaagacaatcagttccgtacattaaaagatatgaaagatagtgaagca
atggagaaaatacgagaggaggtcggggaatga
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