Bacillus cytotoxicus: Bcer98_1919
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Entry
Bcer98_1919 CDS
T00560
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bcy
Bacillus cytotoxicus
Pathway
bcy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bcer98_1919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcy03019
]
Bcer98_1919
03400 DNA repair and recombination proteins [BR:
bcy03400
]
Bcer98_1919
Enzymes [BR:
bcy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Bcer98_1919
Messenger RNA biogenesis [BR:
bcy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bcer98_1919
DNA repair and recombination proteins [BR:
bcy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Bcer98_1919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
ResIII
HTH_7
HTH_29
HTH_10
HTH_35
Sigma70_r4
Sigma70_r4_2
HEM4
Motif
Other DBs
NCBI-ProteinID:
ABS22204
UniProt:
A7GPZ6
LinkDB
All DBs
Position
complement(2030182..2032302)
Genome browser
AA seq
706 aa
AA seq
DB search
MLFTKAQELLSSYFGYSSFRRGQDETIKNVLDGKDTVCIMPTGGGKSICYQIPALVFEGT
TLVISPLISLMKDQVDTLVQNGISATYINSSISITEANQRIQLAKQGHYKLLYVAPERLD
SMEFVDQLIDMKIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPIVLALTATATP
QVREDICRALDIDPTHTIMTTFERENLSFSVIKGQDRNAYLKEYIRQNQKESGIIYAATR
KVVDQLYEELSKAGVSVARYHAGMSDYERDEQQERFLRDEVSVMVATSAFGMGIDKSNIR
YVIHYQLPKNMESYYQEAGRAGRDGLDSECILLYSSQDVQVQRFLIDQSTGESRFSNELE
KLQYMTDYCHTEQCLQSFILDYFGEVPEGDCGRCGNCTDERESIDVTREAQMVLSCMIRT
NQRFGKQMIAQVLTGSKNKKVLEFRFHTLPTYGLLSDRSVKEVSEFIEFLISDELIAVEH
GTYPTLKVTAKGKEVLLGNERVLRKERVETRQIVQDHPLFEVLREIRKEIAQSEGVPPFV
IFSDQTLTDMCAKMPKNETELLQVKGIGEHKLAKYGSHFLQAVLHFMEENPNYEETLKTE
VVTERKKLGKASKNSHLETYEMYERGTELSEIAKVRGLSRQTVENHLIRCSEEGMKVEWE
SFVPTEYKSLIESAVQHAEGGLKSIKEQLPDEVSYFMIRAYLQIRK
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgttgtttacaaaagcacaagaacttttatcctcttattttggctactcgtcatttcgc
agaggacaagatgaaacaattaaaaatgtattggatgggaaagatacagtttgtattatg
ccaacaggtggcgggaaatcgatttgttatcaaattcctgcattggtatttgaggggacg
actttagtgatttcacctttgatttcacttatgaaagatcaggtagatacacttgtacaa
aatgggatttcagccacatatattaatagttctatttcgataacagaagcgaatcagcgt
atacagttagcgaagcaagggcattataaattgctttatgttgcaccggagcgtctcgat
tcgatggaatttgtggatcaattaatcgatatgaaaataccgatgatcgcaattgatgaa
gcccactgtatttcacaatggggacatgatttccgtccaagttatttacatatacatcgc
atattagattacttgccagaaaagccaatcgtgctcgcgttaactgcaactgcaacgccg
caagtacgagaagacatttgccgtgcattagacattgatcctactcatacgatcatgaca
acgtttgagagagaaaacttatcattctctgttataaaaggacaagatcgcaatgcatat
ttgaaagaatatattcggcaaaaccaaaaagaatctggaatcatttatgcggcaacgcga
aaagtcgtagaccagctatatgaagaactaagtaaggccggcgtttctgttgcgcgctat
cacgctgggatgagcgactatgaacgtgatgaacaacaagaacgttttttgcgagatgaa
gtcagtgtcatggtcgcaacatcggcatttggtatgggaattgataaatcgaatataaga
tatgtaattcattatcaacttccgaaaaatatggaaagctattatcaagaagcaggtcgt
gctggtcgtgatggattagatagtgaatgtattttgttatattcctctcaagatgtacaa
gtgcaacgttttttaattgatcaatcgacgggagagtcacgtttctcaaatgaattagag
aaattgcagtacatgaccgattattgccatacggaacaatgtttacaatcttttattcta
gattactttggcgaagtgccagaaggggattgtggccgctgtggaaattgtacagatgag
cgtgaaagtattgatgtaactagagaagcgcaaatggttttatcctgtatgattcgaacg
aatcaacgctttggaaaacaaatgattgcacaagtgttaacaggatcaaaaaataaaaaa
gtgcttgaatttcgttttcatacacttccaacgtatgggcttttatcagatcgcagtgta
aaagaagtgagtgaatttattgagtttttaatttcggatgaattaattgcggtagagcat
ggaacgtatccaacattaaaagtaaccgcaaaaggaaaagaagtattgcttggaaacgaa
cgtgtactgcgtaaagaaagagtagaaacaagacaaattgtacaggaccatccgcttttc
gaagtgcttcgtgaaattcgaaaagagattgcacaaagcgaaggggtaccgccatttgtt
attttttctgatcaaacgttaacagatatgtgtgcgaaaatgccgaaaaacgagacagaa
ctcctgcaagtaaaaggaataggcgagcataaactggcgaagtacggttctcacttttta
caagcagtgcttcattttatggaagaaaatccgaattacgaagaaacattaaaaacagaa
gttgtgactgagcgaaaaaaattagggaaagcttctaaaaactctcatttagaaacgtat
gaaatgtatgagcggggcactgaactcagtgagattgcaaaagtaagaggtttatcgcgt
caaacggtagaaaatcatttaattcgttgttcggaagaagggatgaaagtagagtgggaa
agctttgtgccaacagagtataaatcacttatcgaatcagcagttcaacatgcagagggc
ggtttaaagtcaataaaagaacagctcccagatgaagtgagttattttatgattcgggct
tatttacaaataagaaagtag
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