Bacillus cytotoxicus: Bcer98_2679
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Entry
Bcer98_2679 CDS
T00560
Name
(GenBank) beta-lactamase domain protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bcy
Bacillus cytotoxicus
Pathway
bcy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Bcer98_2679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcy03019
]
Bcer98_2679
Messenger RNA biogenesis [BR:
bcy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Bcer98_2679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
DUF4453
TraI_hel_assoc_N
Motif
Other DBs
NCBI-ProteinID:
ABS22913
UniProt:
A7GS05
LinkDB
All DBs
Position
2762855..2764522
Genome browser
AA seq
555 aa
AA seq
DB search
MKFLKNDQVAVFALGGLGEIGKNTYAVQFQDEIIIIDAGIKFPEDELLGIDYVIPDYTYF
VRNEDKIKGVFITHGHEDHIGGIPYLLRQVNVPIYGGKLAIALIKNKLEEHGLLRKAKLY
EIQEDDVIKFKKTSVSFFRTTHSIPDSFGVVVKTPQGQIVHTGDFKFDFTPVGEPANLTK
MAEIGKDGVLCLLSDSTNSEVPNFTMSERRVGDSIQDIFRKVEGRIIFATFASNIHRLQQ
VVEAAVENNRKVAVFGRSMEAAIQIGQDLGYIRCPKDTFVDAAQINKLPANQIVILCTGS
QGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTVSVSRTINMLYRAGAEVIHGKL
TNIHTSGHGGQEEQKLMLRLIKPKYFMPIHGEYRMQRMHMSLANDCGIPEENCFIMDNGD
VLALRSDEANIAGKIPSGSVYIDGNGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKEFKI
AAGPDIISRGFVYMRESSDLINDAQTLITTHLEKVMERKTTQWSEIKNEITDTLAPFLYE
KTKRRPMILPIIMEI
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttctaaaaaacgatcaggttgccgtattcgctcttggtggactgggcgaaatc
ggcaaaaatacatatgctgttcaatttcaagatgaaattattataattgatgctggaatt
aaatttccagaagacgaacttctcgggatcgactatgtgatccctgattacacttatttt
gtacgaaacgaagataaaattaagggcgtcttcatcacacatggtcatgaagatcatatc
ggtggaatcccttacttattacgccaagtaaatgttccaatttacggagggaaattagcg
attgccctaattaaaaataaattagaagagcacggtttacttcgtaaagcaaaactttac
gaaattcaagaagatgatgtaattaaatttaaaaaaacgtctgtttccttcttccgtaca
acacatagcattccagattcatttggcgttgttgtgaaaacaccacaggggcaaattgtt
catacgggagactttaaatttgatttcacaccagttggtgagccagcaaatttaacgaaa
atggctgaaatcggtaaagatggtgtactttgcctattatccgatagcacaaatagcgaa
gttcctaactttacaatgtctgaacgtcgcgttggtgatagcattcaagatattttccgc
aaagtagaaggacgtattatttttgctactttcgcatctaatatccaccgtttacaacaa
gttgtcgaagctgctgttgaaaacaatcgcaaggtagctgtattcggtcgaagtatggaa
gctgccattcaaatcggacaagaccttggttatattcgttgtccaaaagatacattcgtc
gatgcagctcaaatcaataaactacctgctaaccaaattgttattttatgcacaggtagt
caaggtgaaccaatggcggcactttctcgcattgccaacggcacacatcgtcaaatccaa
attattcctggggatacggttgtattttcttcttctcctattccaggaaatacagttagt
gtaagccgtacaatcaacatgttataccgtgctggtgctgaggtcatccatggtaaactt
accaatattcatacgagcggacacggcggacaagaagaacaaaaacttatgttacgtctc
attaaaccgaaatatttcatgcctattcacggtgaatatcgtatgcaacgcatgcatatg
agcttagcaaatgattgtggtattcctgaagaaaattgttttatcatggacaatggtgat
gtactcgccttgcgttcagatgaagcaaatattgctggaaaaatcccatcagggtctgtt
tatattgatggaaatggaattggcgacatcggaaatatcgtattacgtgaccgtcgtatt
ctttcagaagaaggacttgtaatcgtcgttgtcagcattgatatgaaagaatttaaaatt
gccgcagggcctgacattatctctcgtggattcgtttatatgcgtgaaagtagcgattta
attaatgacgcacaaacattaattacaacacatctagaaaaggtgatggaacgaaagaca
acacaatggtctgaaattaaaaatgaaattacagatacattagctccattcctatatgaa
aagacgaagcgccgtccaatgattttaccaatcattatggaaatataa
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