Bacillus cytotoxicus: Bcer98_3013
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Entry
Bcer98_3013 CDS
T00560
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bcy
Bacillus cytotoxicus
Brite
KEGG Orthology (KO) [BR:
bcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcy03019
]
Bcer98_3013
03009 Ribosome biogenesis [BR:
bcy03009
]
Bcer98_3013
Enzymes [BR:
bcy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Bcer98_3013
Messenger RNA biogenesis [BR:
bcy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Bcer98_3013
Ribosome biogenesis [BR:
bcy03009
]
Prokaryotic type
rRNA helicases
Bcer98_3013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
ABS23240
UniProt:
A7GSY2
LinkDB
All DBs
Position
complement(3061067..3062377)
Genome browser
AA seq
436 aa
AA seq
DB search
MTIQTFTQYNFQPFLIDAVRELRFTEPTEIQKKIFPVVKKGVSIIGQSQTGSGKTHAYLL
PTINQIDPKREEVQLVITAPTRELAQQIYQEIIKLTKFCTEEQMITARCLIGGTDKQRSI
EKLKKQPHIVVGTPGRIKDLIEEQALFVHTAETIIVDEADLMLDMGFIQDVDKVAARMPK
NLQMLVFSATIPQKLKPFLKKYMENPEHIHINPKQVAAGNIEHYLVPSRHRNKIEIVKNM
LLQFQPYLAIVFTNTKKMAEEVANGLTERGLKVGRIHGDLSPRDRKKMMKQIRDLEFQYI
VATDLAARGIDIEGISHVINYEIPSDLDFFVHRVGRTARAGYSGIAVTIYDARDEEAIDS
LEKQRNITFKHVELRNGEWIDLGERNRRQSRKKPNNELDIMATKVVKKPKKVKPGYKKKL
AAEREKVKKKYSRKKR
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
gtgacaatacaaacatttacacagtataattttcaaccgtttttaatagatgcagttcgt
gaattacgttttacggagccgacagaaattcaaaagaaaatattccctgttgtaaaaaaa
ggagtaagtataattggacaatcccaaacaggatcaggaaaaacacatgcatacttacta
ccgacaatcaatcaaattgatccaaaacgtgaagaagtgcagcttgtgattacggcgcca
acgcgtgagttagcacaacaaatttatcaagaaattattaaattaacgaagttttgtacg
gaagaacaaatgattacagcgcgttgcttaattgggggaacagataaacagcgatcgatt
gaaaaattgaaaaagcagccacatatcgttgttggaacgccaggtcgtattaaagattta
atagaagagcaagctttatttgttcatacagcagaaacgattattgtcgatgaagcagat
ttaatgcttgatatgggatttattcaagatgtagataaagttgcagcgcgcatgccgaaa
aatttgcaaatgctcgttttttctgcgacgattccgcaaaaattgaaaccatttctgaaa
aaatatatggagaatccagagcatattcatattaatccgaagcaagttgctgcgggaaac
attgaacattatttagttccatcgagacatcgtaataaaattgaaatagtcaagaatatg
ttgcttcaatttcagccgtacttagcaattgtttttacaaatacgaaaaaaatggcagaa
gaagttgcgaatggattaacagagcgaggattaaaagtaggacgtattcatggtgaccta
tcacctcgtgaccgcaaaaaaatgatgaaacaaattcgtgatttggaatttcaatacatt
gttgcgacagacttagcggcacgtggtattgatatagaaggaattagtcatgttattaac
tatgaaattccgtctgacttagacttctttgttcaccgtgttggtcgtacagcacgcgct
gggtattctggtattgctgtaacgatatatgatgcgcgtgatgaagaagcgatagatagt
ttggaaaaacaacgtaatattacgtttaaacatgtagaattgcgaaatggtgaatggata
gatttaggggagcgcaaccgacgtcaaagccgtaaaaaaccaaataatgagttggatatt
atggcaacgaaagttgtgaaaaaaccgaaaaaagtaaagcctggatataagaaaaaatta
gcagctgaacgtgaaaaggtaaagaaaaaatatagtcgtaaaaaaagataa
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