Cytobacillus dafuensis: FSZ17_00660
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Entry
FSZ17_00660 CDS
T06982
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bda
Cytobacillus dafuensis
Pathway
bda03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bda00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FSZ17_00660 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bda03021
]
FSZ17_00660 (rpoC)
03400 DNA repair and recombination proteins [BR:
bda03400
]
FSZ17_00660 (rpoC)
Enzymes [BR:
bda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FSZ17_00660 (rpoC)
Transcription machinery [BR:
bda03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FSZ17_00660 (rpoC)
DNA repair and recombination proteins [BR:
bda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FSZ17_00660 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QED45937
UniProt:
A0A5B8YZS7
LinkDB
All DBs
Position
128304..131903
Genome browser
AA seq
1199 aa
AA seq
DB search
MIDVNNFEYMKIGLASPDKIRSWSHGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTESGDTALEKKQLLSEKEYRAYREKYGNKFQASMGAESIKKLLS
DIDLNKEVDILKEELKTAQGQRRTRAIKRLEVLEAFRGSGNEPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVEKGLSHNIKSAKRKIERVQPEVWDVLESVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSSEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERDGAVGEGMIFKDINEALLAYQNGYVHLHTRVAVH
AGSLKNPQFTPEQNQKLLITTVGKLIFNEILPASFPYINEPTRQNLEVETPAKYFVEKGQ
EVLSIIREMPLVDPFKKKILGNIIAEVFKRYKITETSKMLDRMKDLGFKHSTKAGITVGV
SDIVVLGEKKQIIHEAQVKVDNVMKQFRRGLITEDERYDRVISIWSAAKDSIQEKLMKSL
EKSNPIFMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVREDDCGTDRGLLISALKDGTEIIETLE
ERLIGRYARKAIRHPETKEVIIPENGLITEDLAEEVTNANVQEVWIRSAFTCNTRHGVCK
KCYGRNLATGQEVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQELF
EARNPKGLAIITEIDGVVVGINEGRDRQHEIIVQGEVESRTYTAPYTARLKVSINDTVEC
GQELTEGSIDPKELIRVKDVTAVQEYLLREVQKVYRMQGVEIGDKHIEVMVRQMLRKVRV
IDAAETDVLPGTLLDIHQFTDANEKALLSGKLPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMQRYRRAEPYTNEEVIEDAVTIE
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
ttgatagatgtaaataattttgagtatatgaaaatcggtcttgcttcaccagataaaatt
cgttcttggtcacatggtgaggtaaaaaaaccagaaacgattaactatcgtacattaaaa
ccagaaaaagatggtttgttttgtgagcgtatttttggacctacaaaggactgggaatgc
cattgcggaaaatacaagcgtgtacgctataaaggtgtagtctgtgatcgatgcggtgtt
gaagttacacgtgcaaaggtccgtcgtgaaagaatggggcatattgaacttgcagctcca
gtttcacacatttggtattttaaaggaattccaagcagaatgggacttgttcttgacatg
tctcctcgtgcgcttgaagaagtgatttattttgcttcttacgtagtaacggagtcgggc
gatacagctcttgagaaaaaacagctgttatcagaaaaggaataccgtgcgtaccgtgaa
aaatatggtaataagtttcaagcttcaatgggtgcagagtccattaaaaagcttctttca
gatattgatttgaataaagaagttgatattttgaaagaagaattaaaaactgcacaagga
cagcgtagaacacgcgcaattaagcgtcttgaagtattagaagcattccgtggatcaggc
aatgagccatcatggatgatccttgatgttcttcctgttataccgccagagcttcgtccg
atggttcaacttgatggtggccgttttgctacatctgatttgaacgatttataccgtcgt
gtcattaaccgaaataaccgtttaaaacgattattggatcttggtgcgcctagtattatt
gttcaaaacgaaaaacggatgcttcaagaagcagtcgatgcactgatcgataatggtcgt
cgtggccgtccagtaacaggtccaggaaatcgtccgttaaaatcgctttcccatatgcta
aaaggaaagcaaggccgcttccgtcaaaacctattagggaaacgtgtagactattcaggt
cgttcggttattgttgttggaccgaatttgaaaatgtatcaatgtggtcttccgaaagaa
atggccttagagctatttaagccattcgtcatgaaagagttagtagaaaaaggcttatca
cataatattaaatcagcaaaacgtaaaattgaaagagttcagcctgaagtttgggatgtt
ttagaaagtgtcattaaagagcatccagttcttcttaaccgtgctccaactcttcataga
ttgggaattcaagcattcgaaccaacattggttgagggtcgtgcgattcgtcttcacccg
ctcgtatgtacagcttacaacgctgactttgatggtgaccaaatggctgttcacgttcct
ctttcatctgaggctcaagctgaagcacgtctattaatgcttgcagctcaaaatatcttg
aacccgaaagatggaaaaccggttgttactccttctcaggatatggtattaggtaactac
tatctgacactggaaagagatggcgctgttggggaaggtatgatctttaaggatatcaat
gaagcgcttctagcttatcaaaatggatatgttcatttgcatacgcgtgtagctgttcat
gctggctccttaaagaatccgcaatttacaccagaacaaaatcaaaagctattgattaca
acagtaggaaagcttatttttaatgagattttaccagcgtcattcccgtatattaatgaa
cctacaagacaaaatcttgaggtggaaactccagctaagtattttgtggaaaaaggtcaa
gaagtactttctattattcgagaaatgccgcttgtggatccatttaagaagaagatcctt
ggaaatatcattgcagaagtattcaaacgttacaagattacagaaacgtctaaaatgctt
gatcgcatgaaagatttaggtttcaaacactctacaaaagctggtattacggtcggggtt
tccgatatcgttgtcctaggagagaagaaacaaatcattcatgaagctcaagttaaagtt
gacaatgttatgaagcaattcagacgtggtcttattactgaagacgagcgctatgatcgt
gtaatttcgatttggagtgctgcaaaggattcaatccaagaaaaactaatgaagtccctt
gaaaaatcgaacccaatctttatgatgagtgactctggtgcccgtggtaacgcatctaac
tttactcaattagcgggtatgcgtggtctgatggccaacccagctggacgtattattgag
ttgccaattaaatcaagtttccgtgaaggtttaacggtattagaatactttatttctact
cacggtgctcgtaaaggtcttgccgatacagcattaaaaacagctgactctggttactta
actcgtcgtttagtagatgtagcacaagatgtcatcgttcgtgaagatgattgcggaaca
gatcgtggtttattaattagtgctttaaaagatggcactgagattattgagacacttgaa
gagcgtctaatcggcagatatgccagaaaagcaataagacatccagaaacaaaagaagtg
attattcctgaaaatggtctaattactgaagatcttgctgaggaagttacaaatgcaaac
gttcaagaggtttggattcgctctgcctttacatgtaatacacgtcatggtgtgtgtaag
aagtgttatggccgtaatttagcaactggtcaagaggttgaagtaggtgaagcagttggt
attatcgctgcacaatctatcggtgagccgggaactcagttaacgatgcgtacattccat
acaggtggagttgctggagatgatattacacaaggtttaccgcgtattcaggaattgttt
gaagcacggaatcctaaaggtctggcaattatcactgaaattgatggtgtcgtagttgga
attaatgaaggccgcgaccgtcaacacgaaataattgttcaaggggaagtggagtcccgc
acatatacagctccatacacggctcgtctaaaagtgtcaattaatgacactgtagagtgt
ggacaggaactaacagagggctcaattgatccgaaagaattaattagagtgaaggacgtt
acagctgttcaagagtatttactgcgtgaagttcaaaaagtataccgtatgcaaggggta
gaaatcggcgataagcatatcgaagtaatggtacgtcaaatgcttcgtaaagttcgtgtc
atcgatgctgctgaaacagatgtccttccaggtacactgcttgacattcatcaatttaca
gatgcaaatgaaaaagcacttctatcaggtaaattgccagcgacaggtcgtccagtgttg
cttggaattacgaaagcatctcttgaaacagattcattcctatctgcggcatccttccaa
gaaacaacaagagttcttacggatgcagccattaaaggaaaacgtgatgaattattagga
ttaaaggaaaatgttatcattggaaaacttgttccagctggaacgggaatgcagcgctat
cgtcgagctgagccttacacaaatgaagaggttatcgaggacgccgtaacaatagaataa
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integrated database retrieval system
