Cytobacillus dafuensis: FSZ17_06005
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Entry
FSZ17_06005 CDS
T06982
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bda
Cytobacillus dafuensis
Pathway
bda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FSZ17_06005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bda03019
]
FSZ17_06005
03009 Ribosome biogenesis [BR:
bda03009
]
FSZ17_06005
Enzymes [BR:
bda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FSZ17_06005
Messenger RNA biogenesis [BR:
bda03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FSZ17_06005
Ribosome biogenesis [BR:
bda03009
]
Prokaryotic type
rRNA helicases
FSZ17_06005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
QED46862
UniProt:
A0A5B8Z1H6
LinkDB
All DBs
Position
1233606..1235054
Genome browser
AA seq
482 aa
AA seq
DB search
MCKRSFKDFNLSEEIANALDSLKYENPTEVQSKVIPLVLEKIDLVVKSQTGSGKTASFGI
PICDMIDWKENKPQALILTPTRELAVQVKEDITNIGRFKRIKASAVYGKQPFAIQKTELK
QKTHVVVGTPGRVLDHIERGTLALERISYLVIDEADEMLNMGFIEQVEAIITKLPTNRVT
MLFSATLPEQVKNLSLKYMKAPIDIEIKATGLTTVKIDHSLFKVEEDNKFSILKDVTIVE
NPDSCIIFCRTKDRVDDVCDQLTDLGYSCDKIHGGMVQEDRLDVMNDFRRGEFRYLIATD
VAARGIDIENITHVINYDLPLEKESYVHRTGRTGRAGQKGKAITFVTPFEDRFLSEIEEY
IGFEIPSITPPSIEEVSKKKTAFEAKMSVEPTIKKAKNEQLNKQIMKLYFNGGKKKKLRA
VDFVGTIAKLEGVTVEDIGIITILDTVSYVEILNDKGPIVLKKMKNTTIKGKLLKVYEAK
KK
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaaaagaagttttaaagattttaatttaagtgaagaaatagcaaacgcactggac
agtttaaaatatgaaaatccaacagaagtacagagtaaggtcatacctcttgtgttagag
aagatcgatcttgttgtgaaatcgcaaacaggaagtggaaagacagcatcattcgggatt
cctatttgtgacatgatcgattggaaggaaaacaaacctcaggcgttaattttgacaccg
acgagagaacttgctgttcaagtgaaagaggatatcacgaacataggcagatttaaacga
attaaagcatctgcggtttatggaaaacaaccttttgccattcaaaaaactgaattaaag
caaaaaacacatgtagtcgtcggaactccgggccgtgtgttagatcatattgaaagaggt
actctagcgttagaacggattagctatctagttattgatgaagcagatgaaatgttaaac
atgggttttattgaacaagtagaggcaattataacaaagctacccacaaatcgagtgacg
atgctattttcggctactttaccagagcaagtcaaaaacctatcccttaaatatatgaaa
gcacctatcgatattgaaataaaagcaactggactcaccacagttaaaatagatcattct
ctttttaaagtagaagaagacaataagttttctatacttaaagatgtaacgattgttgaa
aatccagatagttgcatcattttttgtcgaacaaaagatcgagtagatgatgtgtgtgat
cagttaacggatttaggttatagctgcgataaaattcacggtgggatggtacaagaagat
cggcttgatgtgatgaatgattttcgaaggggagaattccgctatttaattgctacagat
gtagccgctagaggaattgatattgaaaatatcacacatgtcatcaactatgatcttcca
ttagagaaagaaagttacgtccatcgcacgggaagaacgggacgtgcgggtcagaagggg
aaagccatcacgtttgttaccccatttgaggatcgatttttaagtgaaattgaagaatat
attggttttgagatcccgagcataacccctccttcaatagaagaggtttcaaaaaagaaa
actgcctttgaagcaaaaatgagtgttgaaccaacgattaaaaaggcaaaaaatgaacaa
ctaaacaaacaaatcatgaagttatattttaatggcgggaagaaaaagaagcttagggca
gtagattttgttggaacgattgctaaactcgaaggagttacagtggaggatattggcatc
attacaattctagatactgtttcttatgttgaaatattaaatgataaaggtccgattgtg
ttgaaaaagatgaaaaacacgacaataaaaggtaagttgttgaaagtatatgaagctaaa
aagaagtaa
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