Cytobacillus dafuensis: FSZ17_07625
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Entry
FSZ17_07625 CDS
T06982
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
bda
Cytobacillus dafuensis
Brite
KEGG Orthology (KO) [BR:
bda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bda03019
]
FSZ17_07625 (yhaM)
Messenger RNA biogenesis [BR:
bda03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FSZ17_07625 (yhaM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Coat_F
GLYCAM-1
Motif
Other DBs
NCBI-ProteinID:
QED47125
UniProt:
A0A5B8Z290
LinkDB
All DBs
Position
1614662..1615606
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AA seq
314 aa
AA seq
DB search
MSKGIVYYEVGEHIEQFLLIKNAAKGIASNGKPFLTLIFQDQSGEIEAKLWDVSDGDEKN
FIPETIVKVSGDILNYRGRNQLRIRQIRPASSSDSVKLSDFLETAPLSTEEMMSKITQYI
FEMKNPNIQRITRHLLKKHQESFIEYPAATKNHHEFVSGLAFHVVSMLDLAKAIAGLYPS
LDTDLLYAGVILHDLGKVIELSGPISTTYTVEGNLLGHITIMVNEIGKAAEELSIMGEEV
IILEHLVLSHHGKAEWGSPKPPLIKEAEILHYIDNLDAKMNMLDRALERVKPGEFTERVF
ALENRSFYKPIFHK
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaggtatagtttattatgaagtgggagaacatattgaacagtttctcctaata
aaaaatgcggctaaaggaatagcaagcaatggaaagccctttttaacacttatttttcaa
gatcagagtggagaaattgaagcaaagctctgggatgtctctgatggtgatgaaaagaat
tttattccagaaacaattgttaaagtttctggtgatatattgaattatcgcggacgtaac
cagctcagaattagacaaataagaccggcgtcctcaagcgactctgttaagctttcagat
tttcttgaaacagcacctctcagtacggaagaaatgatgagtaaaattactcaatatatt
tttgaaatgaagaatccaaatatacaaagaattacacgccatttattaaaaaagcatcag
gagtcattcattgaatatccagctgcaacaaaaaaccatcatgaatttgtttcaggactt
gccttccatgtcgtttccatgcttgatctggcaaaagcaatcgctggcctttatccaagt
cttgatacggatcttttatatgcaggcgtcattttacatgatttgggaaaagtaattgaa
ctttcagggccaatctcgactacttatacagtagagggaaatttacttggacatataaca
atcatggttaatgaaattggtaaagcagctgaagagctttcgattatgggagaggaagtg
attatcctggagcatttagtcctttcccaccacgggaaagctgaatggggaagccctaaa
cctcctctaattaaagaggctgaaattcttcattatattgataatctagatgcgaagatg
aatatgcttgaccgtgctctagaacgtgtgaaacccggtgaattcactgaaagagtattt
gcattggagaatagatcattttataaacctatatttcataaataa
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