Cytobacillus dafuensis: FSZ17_07940
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Entry
FSZ17_07940 CDS
T06982
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bda
Cytobacillus dafuensis
Brite
KEGG Orthology (KO) [BR:
bda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bda03400
]
FSZ17_07940 (addB)
Enzymes [BR:
bda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FSZ17_07940 (addB)
DNA repair and recombination proteins [BR:
bda03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FSZ17_07940 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
RIN1
DUF7658
Dpoe2NT
Motif
Other DBs
NCBI-ProteinID:
QED47181
UniProt:
A0A5B8Z2R8
LinkDB
All DBs
Position
1675854..1679369
Genome browser
AA seq
1171 aa
AA seq
DB search
MSVRLLIGRSGSGKTEYCLNEIRDELKRKPDGSTPIIYLVPEQMTFLSEYKLITTPDLGG
MIRCQVYSFTRLAWRILQETGGMNRYHINSVGISMLIRKIIDEKKEELKLFQRAADKNGF
IQQIEQIITEFKRYCVKPEELAERHDQLSTEEQSNNALQDKLHDLELIYKTFEESIINKY
LDSEDYFRLLSEKALESAYLKNAEVYIDGFYSFTPQEYMIVEQLMKLCKKVTITLTLDRP
FKQNSPDELHLFRMSGENCQTIYEIATANGLQMEEILLSDQKRWEKPSLQHLEANFDTRP
AIGYKGETAVHIGQAVNRRAEIEGIARKINQLVRIEGMRYRNIAILLRNGQDYHDLIETV
FQDYQIPVFIDQKRTMLNHPLVELIRSTLEVINGNWRYEPIFRAVKTELIFPVKLNNTLI
REQMDRLENYVLAKGIQGDKWTNKKRWIYRRIMGLEFDSFVQTDVEKEIEQELNDLRDMI
TGPILRLSRRLNKAKFGRQFCEAVYLYLEELDVPAKIEQWKNSEEEKGNLVKSREHGQVW
NAIMELLDQYVEMLGEDEVSQKQFASILDAGMETLRFSLVPPSLDQVVAADMVNSRLSDI
RAAFIIGMNEGILPSKFSEDGVFADDDREKLLSNGMKIAPSGRTRLLDEDFIAYKAFVTP
SEWLFISYPLANEEGKALMPSSYIKRLQDLLPECKQHYYLADLAELPEVEQLEYVSSLNT
TLAYLTSQLQLKKRNYPIYDFWWDIYNFYLKNESWKRNVQKVLSSLNYENQTRKLNEHIS
QDLYGDTIHASVSRMELFHGCPFSHFVQHGLKLRERQIFRLEAPDIGELFHAALKYIAET
VMNKRMSWTELTRQQCEILAQEAIEMLAPKLQNEILLSSNRHYYIKRKLEQIISRASFIL
SEHAKASGFSPVGLELGFGPGPKADLPPLSFPLKNGTKMELVGRIDRIDKAQEGNDVFLR
VIDYKSSSKDLNINEVYYGLALQMLTYLDIVISHSKSLIGTEANPAGVLYFHVQNPIINT
SKMLTLEEIEQEIFKKFKMNGLLLGEENVVKLMDQTLVTGDSSIISAGIKKDGSLSKRSK
IASKEEFDHLRKYVRGMYTKTGNQIIGGNVDISPYKLKEKTPCTFCSFKSVCQFDESLDG
NDYRLLVPQPKDEVLECMRREVEENANTNTI
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgcgattattgatcggccgttcgggcagcggcaaaacggagtactgtctgaat
gaaattcgtgatgagctaaaaagaaaaccagatggaagcacgcccatcatttatttagtg
ccagaacaaatgacattcttatcagaatataagctgattacaacacctgaccttggcggg
atgatccgttgccaggtctattcattcacccgtctagcatggagaattttacaggaaacc
ggcggcatgaaccgttatcatattaatagcgttggcattagtatgctaattcgaaaaatt
atcgatgaaaaaaaagaagagctaaagctttttcaacgtgctgcagataaaaatggtttt
atccagcagattgaacaaattattacagaattcaaaaggtattgtgttaaaccggaagag
ctggctgaaagacacgaccaattatcaacagaggaacaatcaaataatgcccttcaggat
aagcttcacgatcttgaactcatctataaaacatttgaagaatcgattattaataaatat
ttagattctgaggattattttcgtcttctgtctgaaaaagcgttagaatcagcttattta
aaaaacgcagaagtatatattgatggattttatagctttacccctcaggaatatatgatt
gttgagcagttaatgaagctatgcaaaaaagtaaccattaccctgacgcttgatcggcca
tttaagcaaaattcacctgatgagctgcacttatttagaatgtctggtgagaattgtcag
acaatctatgaaatagctacagcaaatggacttcaaatggaggaaatattgctttccgat
cagaaaagatgggaaaagccgtccctacagcatcttgaagcaaattttgatactcggcct
gctattggctacaaaggagaaacagctgttcacattggtcaagctgttaatcgtcgagca
gaaatcgagggaatcgcaaggaaaattaatcagcttgtccgtatagaaggcatgagatat
cgaaatatagccatccttttacgaaatggacaagactatcatgacctaatcgaaacggtt
ttccaagactatcaaatccctgtttttattgaccaaaaaaggacaatgctgaatcatcct
ctagttgaattaatccgttccacgctcgaggtcattaacggaaactggcgctacgagccg
atttttagagcggtaaaaacagaattaatttttccagtaaaattaaataacactttaata
cgagaacaaatggatagactcgaaaattatgttttggccaaggggattcaaggagataaa
tggacgaataagaaaaggtggatttaccggagaatcatgggattagaatttgattccttc
gttcaaacggatgtcgaaaaagaaattgagcaggagcttaatgatttaagggatatgatt
actggtccaattctaagattgtcacggcgcttaaacaaagcgaaattcggccgtcaattt
tgtgaagcagtttatttatatcttgaggaactggatgttccggctaaaatagaacaatgg
aagaattcggaagaggaaaaagggaatctagtaaaatcaagagaacatggacaagtatgg
aatgccatcatggagcttctagatcaatatgtagaaatgcttggtgaagatgaggtatcg
caaaagcagtttgcttcaatccttgatgctggaatggagactcttcgcttttcacttgtc
cctccttctttagatcaggtagttgcagctgatatggtaaattctcggctttcagatatt
agggctgcatttattattgggatgaatgaaggaattcttccatctaagttttcagaggac
ggagtatttgcagatgatgatagagagaagctcctttcaaatggaatgaaaattgctcca
tcaggcagaactcgtcttctcgatgaagattttatcgcttataaagcatttgtaactcca
tcggaatggctttttataagctatccgcttgcgaatgaggaaggaaaggcattaatgcct
tcatcctatataaaaagattacaggatttactgccggaatgtaaacagcattattattta
gcagacctcgctgaactgcctgaagttgaacagctggagtatgtatccagcttaaatacg
acgctcgcctatttaacatcacaactgcagcttaaaaagagaaattatccaatttatgat
ttctggtgggatatttataatttctatcttaaaaatgagagctggaaaagaaatgtccaa
aaggttctttctagccttaactatgagaatcaaacacgaaaattaaatgaacatattagt
caagatttatatggagataccattcatgctagtgtttctcgaatggaattattccatggt
tgtccgttttcacattttgtccagcacggactaaaacttagggagcggcagattttccgt
ctagaagctcctgatatcggtgaattattccatgctgcacttaaatacattgcagaaact
gttatgaataaaaggatgtcatggacagaattaacaaggcagcaatgtgaaattctcgca
caagaagcaattgaaatgcttgcaccaaaactgcaaaatgaaatattgttaagctccaat
cgccattactatataaaaagaaagctagagcaaattattagcagggcatcatttatatta
agcgaacatgcaaaggcaagcggcttttcaccggttgggctagagcttggattcgggccc
gggccaaaagctgatcttccaccactttccttcccacttaaaaatgggactaaaatggag
cttgtcggaagaattgaccgtatcgacaaggcgcaggaaggaaatgatgtgttccttcgg
gtgatagactataaatccagttcaaaggatttaaatatcaacgaggtatattatggtctt
gcactgcaaatgctcacttatttagacatagtcatttctcattcaaaatcacttattgga
acagaggctaatccggctggtgtcttatatttccatgttcaaaacccaatcattaataca
tcaaaaatgctgacacttgaagaaatcgaacaggaaatctttaaaaagtttaaaatgaat
ggccttttgctcggtgaagaaaatgttgttaagctcatggatcagacactggtgacagga
gattcctccatcatctctgcaggaataaagaaggatggcagtctttcaaaacgctcaaaa
attgcaagtaaagaggaattcgatcatttacgcaaatatgtgcgaggaatgtatacaaaa
acaggaaatcaaattattggcggcaacgtggatatttccccttataaactgaaggagaaa
accccttgtacattttgttcctttaaatctgtctgccaatttgatgaatctctagatggc
aatgattatcgtttacttgttccacaacctaaggatgaggtgcttgaatgtatgagaagg
gaggtagaggaaaatgcaaacacgaataccatctaa
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