Cytobacillus dafuensis: FSZ17_09825
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Entry
FSZ17_09825 CDS
T06982
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bda
Cytobacillus dafuensis
Brite
KEGG Orthology (KO) [BR:
bda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bda03032
]
FSZ17_09825 (topA)
03400 DNA repair and recombination proteins [BR:
bda03400
]
FSZ17_09825 (topA)
Enzymes [BR:
bda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FSZ17_09825 (topA)
DNA replication proteins [BR:
bda03032
]
Prokaryotic type
DNA Topoisomerases
FSZ17_09825 (topA)
DNA repair and recombination proteins [BR:
bda03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FSZ17_09825 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Toprim_3
SAND
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QED47531
UniProt:
A0A5B8Z3M9
LinkDB
All DBs
Position
2078051..2080126
Genome browser
AA seq
691 aa
AA seq
DB search
MSEFLVIVESPAKAKTIERYLGKKYKVKASMGHVRDLPKSQMGVDVENHFEPKYITIRGK
GPVLKELKTAAKKAKKIYLAADPDREGEAIAWHLAHSLNMDITSDCRVVFNEITKEAIKE
SFKHPRPINMDLVDAQQARRLLDRLVGYNISPLLWKKVKKGLSAGRVQSVAVRLIIDREK
EIKAFVPEEYWSIEGDFLKGKDSFEASFYGIGNEKVELKSNQEVQDILSKMKGNKFKVST
VTKKERKRNPAAPFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGIDLGKEGTVGLITYMR
TDSTRISEIAQEEATQFINKTYGQEFLQVEKKKEKKKSNTQDAHEAIRPTSVMREPSSLK
EFLSRDQLRLYRLIWERFVASQMASAIMDTMSVDLKNGDVIFRATGSKVKFPGFMKVYVE
GSDDQAEEKDRMLPDLKEGDEVLKKDIDPKQHFTQPPPRYTEARLVKTLEELGIGRPSTF
APTLDTIQKRGYVALDNKRFIPTELGEIVLELILEFFPDILDVEFTAKMEKDLDYIEEGK
VNWVQIIDDFYGDFEKHLEKAEKEMQEVEIKDEPAGEDCEQCGNPMVFKMGRYGKFMACS
NFPDCRNTKPIVKDIGVKCSKCQEGNIIERKSKKRRIFYGCDRFPECDFISWDKPLPRSC
PKCDNLLIEKKLKKGVQVQCIECDYKEEKQS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtttttagtaatcgttgagtctcctgcaaaggcaaaaacgattgagcgttat
cttggaaaaaaatataaagttaaagcatctatggggcatgtcagagatttaccgaaaagc
caaatgggtgttgatgttgaaaatcattttgagcctaagtatataacgattcgtggtaaa
ggtcctgttctaaaggaattaaagaccgcggctaaaaaggcaaaaaagatttatctcgca
gctgacccggatcgtgaaggtgaagcgattgcttggcatttggctcatagcctaaatatg
gatataacctctgattgccgtgttgtttttaatgaaattacgaaggaagcaatcaaggaa
tcatttaaacatccaagaccaattaatatggatctcgttgatgctcaacaagcaaggaga
cttctcgatcgattagtagggtataatatcagtcctttattatggaaaaaagtaaaaaag
ggcttgagtgcaggaagggtacagtctgtagctgttcgcctaatcatagatcgagaaaaa
gaaatcaaagccttcgttcctgaagagtactggtccattgaaggtgactttttaaaagga
aaagacagcttcgaggcatccttttatggaatagggaatgaaaaggtggaattaaagtcc
aatcaagaagtgcaagatatattaagcaagatgaaggggaacaaatttaaggtttccact
gtcacaaaaaaagaacggaaaagaaatccagctgctccttttacaacttcatcacttcaa
caggaagctgcaagaaagttaaatttccgagccaaaaaaacgatgatgcttgcacagcag
ctttatgaaggaattgatcttggaaaagaaggaactgtcggattaataacttatatgaga
acggattctacaaggatttcggaaatagcccaagaagaagcaacacaatttattaataaa
acatacgggcaagaatttttgcaagttgaaaagaaaaaagaaaagaaaaaatcaaacaca
caggacgctcatgaagctattcgtcctacaagtgttatgagagagccgtcaagccttaaa
gaatttctatctagagatcaactgcgtttatataggctcatttgggaacgcttcgtagca
agtcaaatggcttctgctatcatggatacaatgagtgttgatttaaaaaatggggatgtt
atttttagagcaactggttcaaaagtaaaattcccaggttttatgaaggtctatgtagag
ggatcggacgatcaagctgaggaaaaggatagaatgcttccggatcttaaagaaggtgac
gaagttctaaaaaaagatattgatccaaaacagcattttacacagcctcctccaagatat
actgaagctcgacttgttaaaacattagaagagctaggtattggacgtccatcaacattt
gcaccaactttagacaccattcaaaaacgtggttatgtagctttggataataaaaggttt
ataccaactgaattgggagaaatcgtcttagagttgattcttgaatttttcccagatatt
cttgacgttgaatttaccgccaagatggaaaaagatttggactatattgaagaaggaaaa
gtaaattgggttcaaatcattgatgatttttatggtgattttgagaagcatcttgaaaag
gcagaaaaggaaatgcaagaagtggaaatcaaggatgaaccagctggtgaggattgtgag
caatgtgggaatcctatggtctttaaaatgggacgttatggaaagtttatggcctgcagc
aacttcccagattgccgaaatacgaaaccgattgttaaagatattggagtaaaatgttcg
aagtgtcaagaaggtaatataattgaaagaaaaagtaagaaacgaaggattttttacgga
tgtgatcggttccctgaatgtgactttatttcttgggataagcctttaccgcgcagttgt
ccaaaatgtgataaccttttgattgaaaagaagctgaaaaaaggcgtccaggttcaatgt
attgaatgtgattacaaggaagagaagcaaagttaa
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