Cytobacillus dafuensis: FSZ17_10075
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Entry
FSZ17_10075 CDS
T06982
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
bda
Cytobacillus dafuensis
Pathway
bda03030
DNA replication
bda03430
Mismatch repair
bda03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FSZ17_10075
03430 Mismatch repair
FSZ17_10075
03440 Homologous recombination
FSZ17_10075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bda03032
]
FSZ17_10075
03400 DNA repair and recombination proteins [BR:
bda03400
]
FSZ17_10075
Enzymes [BR:
bda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FSZ17_10075
DNA replication proteins [BR:
bda03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FSZ17_10075
DNA repair and recombination proteins [BR:
bda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FSZ17_10075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
DEDDh_C
RNase_H_2
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
QED47579
UniProt:
A0A5B8Z7F0
LinkDB
All DBs
Position
2126294..2130616
Genome browser
AA seq
1440 aa
AA seq
DB search
MEEAHAKKKRFQLLLQQLQLTDDTIVQHLQQAEIDKVVIEKRAKKWHFFFRFDHILPFDI
FILFTKRLEKSFSHIAKIAFTIEVRNQQFNDQLILGYWQNCIQEMEGMAPPLLKLLNEQF
PTVQGNKLLINVRNDTEGLSIKRKYAGIISSVFETYGFPSLVIDTEISAEASNEEYKRFL
EAKQKEDQERGLQALIDMQKKEAEATSGDAATPQGPLMIGLTIKDDADYRKLIDIVDEER
RLAIEGYVFSAETKELRSGRTLLTFKITDYTSSILVKMFSRDKEDAALFQLVKKGMWLKV
RGSIQNDTFVRDLVMIGNDINEIKPDTRKDTAPEDEKRVELHLHTPMSQMDAVTSVSTLI
GQAKKWGHKAIAVTDHANVQSFPEAFSAGKKNDIKILFGVEVNLVDDGVPIAYNSSHRKL
TDDTYVVFDVETTGLSAVYDTIIELAAVKIQNGEIIDRFESFANPHHPLSATTINLTGIT
DDLVENAPEVDEVLQKFYNWTNDAILVAHNASFDMGFLNVGYKKIGLGKAENPVIDTLEL
ARFLYPDMKNHRLNTLAKKFDVELTQHHRAIYDAEATGYLLLKMLKDAAEKEIEFHDQFN
DHMGEGNAYQRARPSHCTLLAQTEVGLKNLFKLVSISHLNYFYRVPRIPRSLLQKHREGI
LVGSSCDKGEVFEGMMQKSPEEVEEIATFYDYLEVHPKEVYAHLIELELIKNEKALEDII
SNIVKLGEKLELPVAATGNVHYLDPNDKIYRQILISSQGGANPLNRHRLPDVHFRTTNEM
LELFSFLGKEKAKQIVVENTNKIADMIDVIKPIKDDLYTPKIEGADDEMRNMSYSMARHI
YGDNLPEIVEARLEKELKSIIGHGFAVIYLISHKLVKKSLDDGYLVGSRGSVGSSLVATM
TEITEVNPLPPHYVCPDCKHSEFFNDGSVGSGFDLPDKDCPQCGAKYKKDGQDIPFETFL
GFKGDKVPDIDLNFSGEYQPRAHNYTKVLFGEDYVYRAGTIGTVADKTAFGYVKAYQQDN
NLQLRGAEVERLASGCTGVKRTTGQHPGGIIVVPDYMDIYDFSPIQFPADDKNSEWKTTH
FDFHSIHDNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFSGTESLGVSEE
QIMCKTGTLGIPEFGTRFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIHNKIC
TLSEVIGCRDDIMVYLIYQGLEPAFAFKIMESVRKGKGLTDEMEEEMRKNKVPEWYIDSC
KKIKYMFPKAHASAYVLMAVRIAYFKVHHPLLYYAAYFSVRAEDFDIGAMVKGSQSIRSV
IEEINAKGLDASTKEKNLLTVMELALEMTERGFSFKKVDLYRSSANEFIIDGKTLIPPFN
SIPGLGTNAAFNIVKAREEGEFLSKEDLQQRGRLSKTIIEYLDNHGCLESLPEQNQLSLF
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcccatgcaaaaaaaaagcgattccaactcttgctccaacagctgcagctt
acggatgatacaatcgtgcagcatttacagcaagctgaaatcgataaagttgtgattgaa
aagcgcgctaaaaagtggcatttctttttccgttttgatcatattttgccatttgatata
tttattttatttacaaaaagattagaaaaatcattctctcatatagcaaaaattgctttt
acgattgaagtgaggaatcaacaattcaatgatcaattaattctagggtattggcagaat
tgtattcaggaaatggaaggaatggcaccaccgcttttaaaattgttaaatgagcaattt
cctacagtacaaggaaacaagcttcttataaatgtaagaaatgatacagaaggtctgtct
attaagagaaaatatgcaggaattatttcgagtgtttttgagacatatggttttccttct
ttagtgattgatactgaaatttctgcagaagcatcaaatgaagagtataagagattctta
gaagcgaaacaaaaggaggatcaagaacgcggtcttcaagcattgatagacatgcaaaag
aaagaagcagaggctacttctggtgatgctgcaactcctcaaggtcctcttatgatcgga
ttaacaattaaagatgatgctgattacagaaagctgattgatatcgttgatgaagaacga
cgactcgccattgaaggatatgtattctcagctgaaacaaaagagcttcgtagcggtaga
acacttttaacctttaagataacggattacacaagctcaattcttgtcaaaatgttttct
cgtgataaagaagatgcggcattgtttcaactagttaaaaaaggaatgtggcttaaagta
cgaggcagcattcaaaatgacacatttgtccgtgatctcgttatgatcggaaatgatatt
aacgagattaaaccagacacaagaaaagatactgcaccagaggatgaaaaaagagtagaa
cttcatcttcacactccgatgagccagatggatgcagttacatctgttagcactcttata
gggcaggcaaagaaatggggacataaggcaatagctgttactgaccacgcaaatgtacag
tcctttcctgaagcatttagtgcaggaaagaagaatgatataaaaatattattcggtgtt
gaagtaaacttagtagatgatggtgttccaatcgcatacaacagttctcatcgaaagtta
acagatgacacatatgtcgtgtttgacgtggagacgacaggtttatctgctgtctatgat
acgatcattgagcttgcagcagtaaaaatacaaaacggagagatcattgatcgttttgaa
tcatttgctaacccacaccatcctctttctgcaacaacaataaacttgaccggaattacg
gatgatcttgtggaaaatgctccagaggtagatgaagttttacaaaagttttataactgg
acgaatgatgcaatcctcgttgctcataacgcttcttttgatatgggtttcttaaatgtt
ggctacaaaaaaatcggcctagggaaggcagaaaatccagttattgatacattagagctc
gctagatttctatacccagacatgaaaaatcatcgattaaatacactagcgaagaaattt
gatgttgaacttacacagcatcatagagccatatatgacgctgaagcaacaggctatctt
ttactaaaaatgctaaaggatgcagcagagaaagaaattgaatttcacgatcaattcaat
gatcatatgggagaaggaaatgcttatcaaagggcaaggccatcacattgcactttactt
gctcaaactgaagtcggcttaaaaaatctttttaagcttgtgtccatatcccatctcaat
tatttttatcgagtcccgcggatacctagatcactgcttcagaagcaccgtgaaggaatt
ctagttggttcaagctgtgataaaggggaagtttttgagggaatgatgcaaaagtctcca
gaagaagttgaagaaattgcaacattttatgactatttagaggttcatcctaaagaggtt
tatgcccatttaattgaacttgaactaataaaaaatgagaaggcacttgaggatatcatt
agtaatattgtaaaacttggtgaaaagctggaactgccagttgctgcgactggaaatgtt
cattatttagatcctaatgataaaatttaccggcaaattcttataagttctcaaggtgga
gcgaaccctttaaatcgccaccggcttccagatgttcatttccgtacgacgaatgaaatg
ctcgaattattttcattcctaggaaaagaaaaggcaaaacaaattgttgtagagaatacg
aataaaattgctgacatgatagatgtcattaagccaattaaagacgatctctacacgccg
aaaattgaaggcgcagatgatgaaatgcgcaatatgagctactcaatggcaagacatata
tacggagataacttgccagaaattgttgaagctcgtctggaaaaagaacttaaaagtatc
atcggtcatggatttgccgttatttatcttatatctcataaactcgtaaaaaaatcatta
gatgatggatatcttgtaggttctcgtggctcagtaggttcgtccttagttgcaaccatg
acggaaattacagaagtgaacccgctacctccgcattatgtttgtccagattgcaagcat
tctgaattctttaatgatggctcagtgggctcgggttttgacctccctgacaaggattgt
cctcaatgtggagctaaatataaaaaagacggacaggatattccctttgagacatttttg
ggatttaagggagataaagtgccggatattgacttaaacttttctggtgaatatcagccg
cgtgcccataattatacgaaggtgttattcggagaagattatgtataccgtgcaggtaca
atcggtactgtcgctgataaaacagcattcggttatgtgaaagcctatcaacaagataat
aatcttcaattaagaggtgccgaagtggagcggcttgcctctggttgtactggtgttaaa
agaacaacaggacagcatcctggtggaattatcgttgtgcctgattatatggatatttat
gatttctcaccaattcaatttccagcagacgataaaaattcagaatggaaaacaacccat
tttgatttccattccatccatgataacctattaaagctcgatattcttggacacgatgat
ccaactgttatacgtatgcttcaagatctaagtgggattgatccaaaaacaatacctaca
gatgatccggaagtaatgaaaatatttagcggtacagaatctcttggtgtatcagaagag
cagataatgtgtaaaaccggaacacttggtattccagagtttggaacaagatttgtaagg
caaatgttagaggatacaaagcctacaaccttttcagaactcgttcaaatatcaggtttg
tcccacggtacagatgtatggcttggtaatgctcaagagctcattcacaataagatatgt
acattaagtgaagtaatcggttgtcgtgatgatataatggtctatttaatctaccaaggg
cttgaacctgcattcgcttttaaaattatggaatcagtccgtaaaggtaaaggtttaaca
gacgaaatggaagaagaaatgagaaaaaataaggttcctgaatggtatattgattcttgt
aaaaaaatcaaatatatgttcccaaaagcgcatgcttctgcatatgtgttgatggcagtg
aggatagcatactttaaagttcatcatcctctcttgtattacgcagcatatttctctgtt
cgcgctgaggatttcgatattggtgcaatggttaaagggtctcaatccattcgatcagtg
attgaagaaataaatgcaaagggtttagatgcttcaacaaaggaaaaaaatcttttaacc
gtgatggagcttgcacttgaaatgacagaacgtggatttagctttaagaaggtagattta
tatcgctcaagcgccaatgagtttatcattgatggaaaaacacttattcctccttttaat
tcaattcctggtcttggaacgaacgctgcttttaacatagttaaagctagggaggaagga
gagttcttgtctaaagaagatcttcagcagagaggaagattatctaagacaatcattgag
tatttggataatcatggatgtttagaatcacttcctgaacaaaaccagctttctcttttt
taa
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