Cytobacillus dafuensis: FSZ17_16400
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Entry
FSZ17_16400 CDS
T06982
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bda
Cytobacillus dafuensis
Pathway
bda03030
DNA replication
bda03430
Mismatch repair
bda03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FSZ17_16400 (holA)
03430 Mismatch repair
FSZ17_16400 (holA)
03440 Homologous recombination
FSZ17_16400 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bda03032
]
FSZ17_16400 (holA)
03400 DNA repair and recombination proteins [BR:
bda03400
]
FSZ17_16400 (holA)
Enzymes [BR:
bda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FSZ17_16400 (holA)
DNA replication proteins [BR:
bda03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FSZ17_16400 (holA)
DNA repair and recombination proteins [BR:
bda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FSZ17_16400 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DUF749
DNApol3-delta_C
DUF1598
NMO
Motif
Other DBs
NCBI-ProteinID:
QED48702
UniProt:
A0A5B8Z6E9
LinkDB
All DBs
Position
complement(3429943..3430962)
Genome browser
AA seq
339 aa
AA seq
DB search
MVFDLWKQIKAKKFAPIYLLYGVESFLINETRQHLINHLLNEEEMDFNLFSYDLEETPID
VALEDAETFPFMGERKLIFLQNPAFLTSEKTKEKVEHNLSKLEAYIKEPSPFTVLVFIAP
YEKLDERKKITKELKRNAAILEAKKLNEVELKSWIKERAALNHVEIEEEAVELILSLAGT
NLFMLTSEIDKLALYSGAGNGINVHMVENLVSRSLEQNIFTLIDKIVNRKIEEALRIYYD
LLKQNEEPIKILSIITGQFRLIYQVKELARRGYGQQQIAGHLKVHPFRIKLAAGQANVFG
DKELTHIMKSLAETDYQMKTGGMNKELLIEMFLFRLHHK
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtggtttttgatttatggaaacaaataaaagctaaaaagtttgctcctatttatttatta
tacggagtggaatcatttcttattaatgaaacaaggcagcatttaatcaatcatttgttg
aatgaggaagaaatggattttaatcttttttcctatgatttagaagaaacgcctattgat
gtagctcttgaagatgctgaaacttttccttttatgggagaaagaaaactaattttttta
caaaaccctgctttcttaacctctgaaaagacgaaggaaaaagtcgagcataatttgtct
aaattggaggcgtatattaaagaaccctctcctttcactgtccttgttttcattgcacct
tatgagaaattggatgaacgaaaaaagattacaaaagaattaaaaagaaatgctgcaatc
ctagaagcaaaaaagttgaacgaagtagagctaaaatcttggattaaagaacgcgcagca
ttaaatcatgtggaaatagaagaggaagctgtcgaattaatactgtctctagctgggaca
aatttatttatgctaacgagtgaaattgataagctggcattatattctggtgcaggtaat
ggaattaatgtacatatggtcgaaaatttagtttctcgttcgttagaacagaatatattt
acgctaattgataaaattgttaaccgcaaaatcgaagaggcattaaggatttattatgat
ttactaaaacagaatgaagagccgataaaaatcctatcgattattactggacaatttagg
cttatttatcaggtaaaggagctcgccagaagaggatacggtcagcagcaaattgcagga
catttaaaagttcatccatttcgaattaagctagccgcaggacaagccaatgtcttcgga
gataaagaactcacacacattatgaaaagcttagctgaaacagattatcaaatgaaaacg
ggtggaatgaataaggaattgctcattgaaatgtttttattccgtttacatcacaaataa
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