Cytobacillus dafuensis: FSZ17_17940
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Entry
FSZ17_17940 CDS
T06982
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bda
Cytobacillus dafuensis
Brite
KEGG Orthology (KO) [BR:
bda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bda03016
]
FSZ17_17940 (thpR)
Enzymes [BR:
bda01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
FSZ17_17940 (thpR)
Transfer RNA biogenesis [BR:
bda03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
FSZ17_17940 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QED48996
UniProt:
A0A5B8ZBW5
LinkDB
All DBs
Position
complement(3767177..3767749)
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AA seq
190 aa
AA seq
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MEKKTHFFFAISLPIETKLKLKEVCSIIKENLPFQRWVHFEDFHITLAFLGAAEEDMLRH
AQILIKEGLKEQKPFSLHINQLGVFGRGDAPRIFWADTLKEERLTEIHNIVYQACVKAGF
ELETRPFKPHITLARKWTGSSSFHTSLLGENNPFHPSPLTFKASEVVLYQTHLDQIPKYE
RTAIFPLLDE
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaagactcattttttctttgcgatcagtttaccaattgaaacaaagctaaag
ttaaaggaagtatgttcgataataaaagagaatcttccgtttcaacgttgggttcatttt
gaagattttcatattactttggcatttcttggagcggctgaggaggatatgctgcgtcat
gcacaaatccttattaaggaaggattaaaagaacagaagcctttttcattacatatcaat
cagcttggagtgttcggtagaggagatgcgcctagaatattttgggctgatactcttaaa
gaagaaagattaacagaaatacataatattgtatatcaggcgtgtgtcaaagcaggcttt
gaactagaaactagaccattcaaacctcatatcacattagcgagaaaatggacaggcagc
tcttcttttcacacaagtctattaggggaaaacaatccttttcatccttcacctctaact
tttaaggcaagtgaggtagtcttatatcagactcatttagatcaaattcctaaatatgaa
agaacagcaatctttccgttgctggacgaataa
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