Cytobacillus dafuensis: FSZ17_21050
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Entry
FSZ17_21050 CDS
T06982
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
bda
Cytobacillus dafuensis
Pathway
bda03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FSZ17_21050 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bda03400
]
FSZ17_21050 (uvrA)
DNA repair and recombination proteins [BR:
bda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FSZ17_21050 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FSZ17_21050 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_21
AAA_29
RsgA_GTPase
AAA_16
nSTAND1
AAA_25
AAA_23
AAA_22
nSTAND3
AAA_33
nSTAND6
DnaJ_CXXCXGXG
Viral_helicase1
NACHT
cobW
ATPase_2
MMR_HSR1
NB-ARC
Septin
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
QED49549
UniProt:
A0A5B8ZCQ4
LinkDB
All DBs
Position
complement(4410648..4413527)
Genome browser
AA seq
959 aa
AA seq
DB search
MAMDKLIVKGARAHNLKNIDVTIPRDKLVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDAIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLYARVGRP
TCPNHNIEISSQTIEQMVDRILEYPERTKLQVLAPLVSGRKGTHVKILEEVKKQGFVRVR
IDGDMHDLGEEIELEKNKKHSIEVVIDRIVVKDGVSSRLADSIETALKLGNGKVLIDVIG
EEELLFSENHACPHCGFSIGELEPRMFSFNSPFGACSHCDGLGSKLEVDVDLVIPNQELT
LNQYAIAPWESTTSQYYPQLLGAICTHYGIDMDIPVKDIPENLLDKILYGSNGEKIFFHY
ENDFGQVRETMVEFEGVIRNVERRYKETSSDYIREQMEKYMAQQPCPGCKGYRLKEETLA
VLISGQHIGKVTELSIEEAFKFFDQLNLSEKEMKIANLIFREIKERLGFLVNVGLDYLTL
SRAAGTLSGGEAQRIRLATQIGSRLTGVLYILDEPSIGLHQRDNDRLIDTMKNMRDIGNT
LIVVEHDEDTMFAADYLIDIGPGAGVHGGEIVSAGTPQEVMDDPNSLTGQYLSGKKFIPL
PVERRKNDGRFIEIKGAKENNLKNVSVKFPLGTFTAVTGVSGSGKSTLINEILHKALAQR
LNRAKTKPGEHKEIKGIEHLDKVIDIDQSPIGRTPRSNPATYTGVFDDIRDVFATTNEAK
VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVKYKG
KNISEILDMTVEDAVVFFENIPKISRKLQTIDDVGLGYVKLGQPATTLSGGEAQRVKLAS
ELHRRSTGRSLYILDEPTTGLHVDDISRLLIVLQRLVENGDTVLVIEHNLDVIKAADYII
DLGPEGGDKGGTIVATGTPEKVAETPESYTGKYLKPILERDRLRMKKEIEEKEATVTNV
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggataaattaatagtaaaaggcgccagagcacataatttgaaaaatattgat
gtcaccattccgcgagataagctagttgtgctgacggggctttccggttcaggaaagtcc
tcgctcgcttttgacacaatctatgcggaaggacagcgcagatatgttgaatctttatct
gcgtatgcaaggcagttccttggtcaaatggataagccggatgtggatgcgatcgaagga
ttatcaccagctatttcgatcgaccaaaaaacgacgagtcggaatccgcgctcgaccgtt
ggaactgtaacagaaatatatgattatctaagattattgtacgcgcgagttgggcgacca
acctgtccgaatcacaatattgaaatctcttcacaaacgatagaacagatggtggaccgt
attcttgaatacccggaacgaacaaagcttcaagtcctcgcaccactcgtatctggaaga
aaaggaacacatgtaaaaattttagaggaagtcaagaagcaaggctttgtccgcgtccgc
attgatggggacatgcatgaccttggcgaagaaattgagctggaaaagaataaaaagcat
tccattgaagttgttatagaccggattgttgtaaaagatggcgttagctcgcgtctcgcc
gattcgattgaaacggctttgaagcttggaaatggcaaggttctcattgatgtaatcgga
gaagaagagctattatttagcgaaaatcacgcttgtccgcattgcggtttttctatcggc
gagcttgagccgcggatgttttcatttaacagcccattcggagcatgttcccactgtgac
gggcttggttcaaagcttgaagtcgatgtagatttagtgatacctaatcaagaattaaca
ttaaatcagtatgccattgctccatgggagtcaacgacttcacaatactatccgcagctt
cttggggcgatctgtacccactatggaattgacatggatattcctgttaaggatattcca
gagaatcttttggataaaattctatatggctcgaatggagaaaaaatcttcttccattac
gagaatgatttcggacaagtaagagagacaatggtagaattcgagggcgtcatccgtaat
gtggagcgccgctataaggagacaagctcggactatatccgagagcaaatggagaagtat
atggcccagcagccatgtccggggtgtaaaggctatcgcttaaaagaggaaacacttgct
gttctcatttctggccagcacattggaaaggtgactgagctatcgatagaagaagccttc
aaattttttgatcaactaaatttatcagaaaaagaaatgaaaatcgcgaatcttattttc
cgtgagatcaaagagcgtttagggtttttagtgaatgtcgggcttgattatttaacatta
agccgtgcagcaggaactctctcaggcggagaggcgcagcggattcgactcgctactcag
atcggctctcgattaacaggtgtgctatatatattggatgagccctcaattggtcttcat
caacgggacaatgatcgcttaatcgatacaatgaagaatatgcgtgatattggaaatacg
cttattgtcgttgagcatgacgaggatacgatgtttgcagcagattacttaatcgatatt
ggtccgggtgcgggagtccacggcggagaaattgtttctgctggaactccacaagaggta
atggatgatcctaattctttaacaggccagtatttatctggaaaaaaattcatcccactt
ccggttgaacgccgtaaaaatgatgggcggtttatcgaaattaaaggggcaaaggaaaac
aatctgaaaaatgtcagcgttaaatttccattaggaaccttcacggctgtcacaggtgtt
tccggctctgggaaaagtacattaataaatgaaatccttcataaagccttagcgcaaagg
ctgaatagagcgaaaacaaagcctggtgagcataaagaaattaaaggaattgagcatttg
gataaagtcattgatattgaccaatcaccaattggaagaactcctcgttcaaatccagct
acgtatacaggcgtgtttgatgatattcgtgatgtctttgcaacgacgaatgaagcaaag
gttagaggatataaaaagggccgtttcagttttaatgtgaaaggtggccgttgtgaagcc
tgccgtggagatggaattataaaaattgaaatgcatttcttgcctgacgtctatgttcca
tgtgaagtgtgccatggaaagcgctataaccgagagacacttgaggttaagtataaaggc
aaaaatatatctgaaattctagatatgactgtagaagatgcggtggtatttttcgagaac
attccaaaaataagccgtaagctccagaccattgatgatgtcggccttggctatgtgaag
ctaggtcagcctgctacaacgctttccggtggtgaagcccaacgcgttaagctcgcttca
gaattacatcgccgctcaactggacgctcgctttatattcttgatgagccgacaactggt
ttgcacgtagacgatatttcaagattgctcattgtccttcagcgactcgttgaaaacggg
gataccgttttagtgattgagcataacttggatgtcattaaagctgccgactatatcatt
gatctcggaccagaaggtggagataaaggtggaacaattgtcgctactggaacacctgaa
aaagtggcagaaacccctgaatcctatactggaaaatatttaaaaccaattttagagcga
gatcgcttaagaatgaaaaaggaaattgaagaaaaagaagctactgtaacgaatgtatag
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